Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735555
Identifier: 187735555
GI number: 187735555
Start: 1265967
End: 1267391
Strand: Reverse
Name: 187735555
Synonym: Amuc_1060
Alternate gene names: NA
Gene position: 1267391-1265967 (Counterclockwise)
Preceding gene: 187735556
Following gene: 187735554
Centisome position: 47.57
GC content: 57.47
Gene sequence:
>1425_bases ATGAATATGAAACATCTTTATTTTTCCATCATGCTGGGACTGGCTCCTGCTTTCTGTCTCCATTCCGCACGCGGAGAACA GCCTGCCCCTGCGGAACACAAACACGAGGACGGTTCCGCCTGCACAGCGGATCACGGCCATGACGACCATCAGCACAAGG CAGGGGAAATCTGTACTCAGGGCCACGCCCACGAAGAACACAGGCATGCGGACGGAGCCGTCTGCACAGGCGACCATGAA CTGGAAGGTCACCAGCACGCGGAAGGGGAAGCATGCACGGGCGACCATGAACGCGAAGAGTCTGCGGAAAAAAATTCCAG CCAACCGGGGGACATGATTCCCGTGCATGTGGATGAAAAAGCGCGCCATTCTCTGGACATGCGCTTTGAGAAAGTGGAGG AAACCTCCCACGGAGCGGCGAAAACCCTTCACGGGCAGATGGTCATTCCTCCCCATGCGGTAACCACATACGCCCTTCCC GCCGCAGGGCGCGTGACATTCAACGTCAAATCCGCACAACAAGTGCGCAAAGGGGAACTGCTGTACACGCTGGCATCCCC GGATATTGTGGAAATGGAAGGAAACGCCTCCCAGGCCAGGGCCGCGCTGGACCGTGCCGCAGCAGAACTCGGAACCCTCA GGGAACGCCGGGCCCAGTTGGAAAAAATCGGCACCCGCAACAGCGAACTGAATACTTCCATCCAATTCAAAGAGGCGGAA ATCCACAGCCTCCGGGCTGCCCTGAACGCCAGCAACAATAAATTGAAACTGGTGATGGAGTCCGGCGTATTGAAAAATAA CCTTCTTTACATATACGCAGCGGCGGATGGTTCCGTTCAGTCCGTGAACATGACCCAAGGGGCCTGGGGAGAACAGGGCG CGCCTGCCCTCGTCATGACCAATAAAGGGGATCTGGAATTTACCACGACCATTTATGGGACGGATCCCGTCCATTATGCA AAAGCCCGGCTGGCCCTGACCAGCGGTAAAAACACGGAACTGCTGAACGGCTCCCTGAGGGTGGCCGAACAGGTAGATCC CGCCACCCAGTCCAGGGCCCTGTATTTTACCCCGGACCGCATACCGGAAGGGACGCATGCCGGCCAGCTGGCCCGGTTGG ATCTGTACTCCCATGACGCCGCCGCGGAGGGCTTCATTCCCGTCCCCAACAGCGCCGTCGTCAAGGTAGGGGTGAACGAC GTGGTTTTCATCAAGGCGGGAAACGACACATTTGTCATGAAAAAAGTGGAAACACTGCCTTCCCGTCAGGGAAAAACTCC CGTCAAGGGGCTGATGCCGGGACAGACCATCGTCACCAAGGGCGGGTATGAGTTGAAATACATCCTGCCCACCGGAGAGG CCGGAAGCAAAAAAGCAGCCGGACACTTCCACGCGGACGGCCAGTTCCACGAAGGAGAACACTAA
Upstream 100 bases:
>100_bases CTTTCCTGGACAATCTGGACAAGCTTCTGGCCGTTCAGGCCCAGCTCCGCTACCTCACCCACGCCAACCTTTAATCCACA TCAACCCTCCACCATCTTTA
Downstream 100 bases:
>100_bases ACGATGTACAAAATAAAAGATTAAGGAACAAATACCCCGGATTCCCTTGAAATAAACCCTTGAATCTTAGGTATTCAGCA ATCAGAATCCATGAACTTTC
Product: Membrane-fusion protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNMKHLYFSIMLGLAPAFCLHSARGEQPAPAEHKHEDGSACTADHGHDDHQHKAGEICTQGHAHEEHRHADGAVCTGDHE LEGHQHAEGEACTGDHEREESAEKNSSQPGDMIPVHVDEKARHSLDMRFEKVEETSHGAAKTLHGQMVIPPHAVTTYALP AAGRVTFNVKSAQQVRKGELLYTLASPDIVEMEGNASQARAALDRAAAELGTLRERRAQLEKIGTRNSELNTSIQFKEAE IHSLRAALNASNNKLKLVMESGVLKNNLLYIYAAADGSVQSVNMTQGAWGEQGAPALVMTNKGDLEFTTTIYGTDPVHYA KARLALTSGKNTELLNGSLRVAEQVDPATQSRALYFTPDRIPEGTHAGQLARLDLYSHDAAAEGFIPVPNSAVVKVGVND VVFIKAGNDTFVMKKVETLPSRQGKTPVKGLMPGQTIVTKGGYELKYILPTGEAGSKKAAGHFHADGQFHEGEH
Sequences:
>Translated_474_residues MNMKHLYFSIMLGLAPAFCLHSARGEQPAPAEHKHEDGSACTADHGHDDHQHKAGEICTQGHAHEEHRHADGAVCTGDHE LEGHQHAEGEACTGDHEREESAEKNSSQPGDMIPVHVDEKARHSLDMRFEKVEETSHGAAKTLHGQMVIPPHAVTTYALP AAGRVTFNVKSAQQVRKGELLYTLASPDIVEMEGNASQARAALDRAAAELGTLRERRAQLEKIGTRNSELNTSIQFKEAE IHSLRAALNASNNKLKLVMESGVLKNNLLYIYAAADGSVQSVNMTQGAWGEQGAPALVMTNKGDLEFTTTIYGTDPVHYA KARLALTSGKNTELLNGSLRVAEQVDPATQSRALYFTPDRIPEGTHAGQLARLDLYSHDAAAEGFIPVPNSAVVKVGVND VVFIKAGNDTFVMKKVETLPSRQGKTPVKGLMPGQTIVTKGGYELKYILPTGEAGSKKAAGHFHADGQFHEGEH >Mature_474_residues MNMKHLYFSIMLGLAPAFCLHSARGEQPAPAEHKHEDGSACTADHGHDDHQHKAGEICTQGHAHEEHRHADGAVCTGDHE LEGHQHAEGEACTGDHEREESAEKNSSQPGDMIPVHVDEKARHSLDMRFEKVEETSHGAAKTLHGQMVIPPHAVTTYALP AAGRVTFNVKSAQQVRKGELLYTLASPDIVEMEGNASQARAALDRAAAELGTLRERRAQLEKIGTRNSELNTSIQFKEAE IHSLRAALNASNNKLKLVMESGVLKNNLLYIYAAADGSVQSVNMTQGAWGEQGAPALVMTNKGDLEFTTTIYGTDPVHYA KARLALTSGKNTELLNGSLRVAEQVDPATQSRALYFTPDRIPEGTHAGQLARLDLYSHDAAAEGFIPVPNSAVVKVGVND VVFIKAGNDTFVMKKVETLPSRQGKTPVKGLMPGQTIVTKGGYELKYILPTGEAGSKKAAGHFHADGQFHEGEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51202; Mature: 51202
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKHLYFSIMLGLAPAFCLHSARGEQPAPAEHKHEDGSACTADHGHDDHQHKAGEICTQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCC GHAHEEHRHADGAVCTGDHELEGHQHAEGEACTGDHEREESAEKNSSQPGDMIPVHVDEK CCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECHH ARHSLDMRFEKVEETSHGAAKTLHGQMVIPPHAVTTYALPAAGRVTFNVKSAQQVRKGEL HHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCCCEEEECCCCCEEEEEEHHHHHHCCCCE LYTLASPDIVEMEGNASQARAALDRAAAELGTLRERRAQLEKIGTRNSELNTSIQFKEAE EEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH IHSLRAALNASNNKLKLVMESGVLKNNLLYIYAAADGSVQSVNMTQGAWGEQGAPALVMT HHHHHHHHCCCCCEEEEEEECCCEECCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEE NKGDLEFTTTIYGTDPVHYAKARLALTSGKNTELLNGSLRVAEQVDPATQSRALYFTPDR CCCCEEEEEEEECCCCCHHHEEEEEEECCCCCEEECCCEEEHHHCCCCHHCCEEEECCCC IPEGTHAGQLARLDLYSHDAAAEGFIPVPNSAVVKVGVNDVVFIKAGNDTFVMKKVETLP CCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEEECCCEEEEEEECCCEEEEEHHHHCC SRQGKTPVKGLMPGQTIVTKGGYELKYILPTGEAGSKKAAGHFHADGQFHEGEH CCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MNMKHLYFSIMLGLAPAFCLHSARGEQPAPAEHKHEDGSACTADHGHDDHQHKAGEICTQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCC GHAHEEHRHADGAVCTGDHELEGHQHAEGEACTGDHEREESAEKNSSQPGDMIPVHVDEK CCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECHH ARHSLDMRFEKVEETSHGAAKTLHGQMVIPPHAVTTYALPAAGRVTFNVKSAQQVRKGEL HHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCCCEEEECCCCCEEEEEEHHHHHHCCCCE LYTLASPDIVEMEGNASQARAALDRAAAELGTLRERRAQLEKIGTRNSELNTSIQFKEAE EEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH IHSLRAALNASNNKLKLVMESGVLKNNLLYIYAAADGSVQSVNMTQGAWGEQGAPALVMT HHHHHHHHCCCCCEEEEEEECCCEECCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEE NKGDLEFTTTIYGTDPVHYAKARLALTSGKNTELLNGSLRVAEQVDPATQSRALYFTPDR CCCCEEEEEEEECCCCCHHHEEEEEEECCCCCEEECCCEEEHHHCCCCHHCCEEEECCCC IPEGTHAGQLARLDLYSHDAAAEGFIPVPNSAVVKVGVNDVVFIKAGNDTFVMKKVETLP CCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEEECCCEEEEEEECCCEEEEEHHHHCC SRQGKTPVKGLMPGQTIVTKGGYELKYILPTGEAGSKKAAGHFHADGQFHEGEH CCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA