Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735553

Identifier: 187735553

GI number: 187735553

Start: 1261959

End: 1262585

Strand: Reverse

Name: 187735553

Synonym: Amuc_1058

Alternate gene names: NA

Gene position: 1262585-1261959 (Counterclockwise)

Preceding gene: 187735554

Following gene: 187735547

Centisome position: 47.39

GC content: 58.69

Gene sequence:

>627_bases
ATGCCCAAACGGAAATCCACCAGAGAGCACCTGCTCAATACGGGTGCCATGATTGTCGGGGAATCCGGGCTGCGCGCCCT
TACCGTTCGCGGCCTGTCCCTGCGGGCCGGCACCAATACAGGGAGCTTTGTCTATCACTTCGGCAACCGGGAAGCTTTTC
TGACCGAGCTTCTGGAACGCTGGTACGAACCTCTGTTCACCGGCATCAGGACCCATGCCAACATTCATCTTCCGGCCTTT
GAAAAACTGGAAGCCATCCTGGGAGACGTCATGGAGTTCCTGCTGCGTCACGGCCAATTCATTGCCCAGCTGGTTCTGGA
CGCCCTGGCAGGGGAACAGGCGGCCATCCGTTTCATTTCAGGAATCCATACGCGCCATCCCCTTGTGCTGCTGGAAACCA
TACGGGAAGCCCAGCAGGAAGGATCCGTGCTCATGGGAGACCCCATGAACATCCTCATTTACCTTGTCTGCTGCGGGGGA
GCCCCCTTTATCCTTTCCGGACAGCTCCAAGTGCACGACCCCAAAGCAGCTCGGCCCGTTCTCGACTTGCTGGGTTCTAT
CCTCAATGATCCGGAAAGCGCCAGACAACGCATGACCTGGGCGCTCCGCGGCATACGGCGGGTCTGA

Upstream 100 bases:

>100_bases
GAGGATGAGCCCCGGTTCCGCTTTTTACAGCAACAGACATAACGAGTCCTTGCCTTGCAGGCCGATAAGGGGCACACATG
GAGGTTCAAGCTTCACCTTC

Downstream 100 bases:

>100_bases
GATTTCAGCAAAGGGGCAGACCGGAAAAACGCGTCGCCTCCCGGCCCCCTGCCGAACCAAAATATCGCCGCCCTTACACG
CACGCTCCCTTCTTACCTCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPKRKSTREHLLNTGAMIVGESGLRALTVRGLSLRAGTNTGSFVYHFGNREAFLTELLERWYEPLFTGIRTHANIHLPAF
EKLEAILGDVMEFLLRHGQFIAQLVLDALAGEQAAIRFISGIHTRHPLVLLETIREAQQEGSVLMGDPMNILIYLVCCGG
APFILSGQLQVHDPKAARPVLDLLGSILNDPESARQRMTWALRGIRRV

Sequences:

>Translated_208_residues
MPKRKSTREHLLNTGAMIVGESGLRALTVRGLSLRAGTNTGSFVYHFGNREAFLTELLERWYEPLFTGIRTHANIHLPAF
EKLEAILGDVMEFLLRHGQFIAQLVLDALAGEQAAIRFISGIHTRHPLVLLETIREAQQEGSVLMGDPMNILIYLVCCGG
APFILSGQLQVHDPKAARPVLDLLGSILNDPESARQRMTWALRGIRRV
>Mature_207_residues
PKRKSTREHLLNTGAMIVGESGLRALTVRGLSLRAGTNTGSFVYHFGNREAFLTELLERWYEPLFTGIRTHANIHLPAFE
KLEAILGDVMEFLLRHGQFIAQLVLDALAGEQAAIRFISGIHTRHPLVLLETIREAQQEGSVLMGDPMNILIYLVCCGGA
PFILSGQLQVHDPKAARPVLDLLGSILNDPESARQRMTWALRGIRRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23143; Mature: 23012

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRKSTREHLLNTGAMIVGESGLRALTVRGLSLRAGTNTGSFVYHFGNREAFLTELLER
CCCCCHHHHHHHHCCCEEECCCCCEEEEEECEEEECCCCCCCEEEEECCCHHHHHHHHHH
WYEPLFTGIRTHANIHLPAFEKLEAILGDVMEFLLRHGQFIAQLVLDALAGEQAAIRFIS
HHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIHTRHPLVLLETIREAQQEGSVLMGDPMNILIYLVCCGGAPFILSGQLQVHDPKAARPV
HHCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCEEEECEEEECCCHHHHHH
LDLLGSILNDPESARQRMTWALRGIRRV
HHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKRKSTREHLLNTGAMIVGESGLRALTVRGLSLRAGTNTGSFVYHFGNREAFLTELLER
CCCCHHHHHHHHCCCEEECCCCCEEEEEECEEEECCCCCCCEEEEECCCHHHHHHHHHH
WYEPLFTGIRTHANIHLPAFEKLEAILGDVMEFLLRHGQFIAQLVLDALAGEQAAIRFIS
HHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIHTRHPLVLLETIREAQQEGSVLMGDPMNILIYLVCCGGAPFILSGQLQVHDPKAARPV
HHCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCEEEECEEEECCCHHHHHH
LDLLGSILNDPESARQRMTWALRGIRRV
HHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA