Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735533
Identifier: 187735533
GI number: 187735533
Start: 1232004
End: 1232171
Strand: Reverse
Name: 187735533
Synonym: Amuc_1038
Alternate gene names: NA
Gene position: 1232171-1232004 (Counterclockwise)
Preceding gene: 187735534
Following gene: 187735531
Centisome position: 46.25
GC content: 41.07
Gene sequence:
>168_bases ATGATTCCCCTGGCCCGCTTCCTGAAAATATTAATTAATTCAAAGTCAAAAAGTTGTGTTTACGTTTCCGCAGTCAACAA ATGGAACCCCGTAAACATTGAAAATACCGGTATGAGGAATAATGATGCCGCTATGAACGACGTATTCCTTCTGCAACCCT GGGAATGA
Upstream 100 bases:
>100_bases ACAAGGAGAGGCCCCCCACCCCCGAAAGGCCTTCCTCCTGACCCTCCAGAGCCGCTCCGGATTTATTCCGGAACGGCTCT GGATTTTTGTTTATCGGAGG
Downstream 100 bases:
>100_bases ATGCCGCTGCCAATCCGCAGGATGCGCTGCCCTTTCAGCCATCCTGGCTGTGAAGCCGAAACGGCAGTCATCATTCATTG TCCATGAAGTAGGCCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MIPLARFLKILINSKSKSCVYVSAVNKWNPVNIENTGMRNNDAAMNDVFLLQPWE
Sequences:
>Translated_55_residues MIPLARFLKILINSKSKSCVYVSAVNKWNPVNIENTGMRNNDAAMNDVFLLQPWE >Mature_55_residues MIPLARFLKILINSKSKSCVYVSAVNKWNPVNIENTGMRNNDAAMNDVFLLQPWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6295; Mature: 6295
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLARFLKILINSKSKSCVYVSAVNKWNPVNIENTGMRNNDAAMNDVFLLQPWE CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MIPLARFLKILINSKSKSCVYVSAVNKWNPVNIENTGMRNNDAAMNDVFLLQPWE CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA