Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735530

Identifier: 187735530

GI number: 187735530

Start: 1229318

End: 1229599

Strand: Reverse

Name: 187735530

Synonym: Amuc_1035

Alternate gene names: NA

Gene position: 1229599-1229318 (Counterclockwise)

Preceding gene: 187735531

Following gene: 187735529

Centisome position: 46.15

GC content: 57.8

Gene sequence:

>282_bases
ATGAAACACCTCCTGCACTACTTCCCCAACCATCCCCGGGAGGAGGAATGCTACATCAGGCTGGCCGGCTACCGGGAAGA
GGAGGAAATCGACGAGCTGATCTACCGGACTGTGGGCCGCATTCCGGGGTCCGAATTCCTGTTCAGGGGAAACCGGGGCA
AACGGTACGAAAAGAAGCTGCGCACCAGCAGGGTGAGCCACATCAACGATCGCTACATGCACCCCCTGGATATCGCCATA
CGGGACCGGAAGCAGAAGGAACAGGAAGCCAGGAAATACTGA

Upstream 100 bases:

>100_bases
TGAAAACGGGGGATTAACCCATTTTCTTCCCTCAAGGCATCCAAACGGGGTCTTCTGTTTCCTTCCCGGATTTATACATT
TTTCCGTTTGAATATGGGCC

Downstream 100 bases:

>100_bases
AACCGCCGCGGCCGTTGAACAATTCCCGGTTGCGCATTTTTCCCTGTTATGCTATCAGGTCAGTCATGAGTCTGCCCAGG
CTGTCCATGCTCCTGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKHLLHYFPNHPREEECYIRLAGYREEEEIDELIYRTVGRIPGSEFLFRGNRGKRYEKKLRTSRVSHINDRYMHPLDIAI
RDRKQKEQEARKY

Sequences:

>Translated_93_residues
MKHLLHYFPNHPREEECYIRLAGYREEEEIDELIYRTVGRIPGSEFLFRGNRGKRYEKKLRTSRVSHINDRYMHPLDIAI
RDRKQKEQEARKY
>Mature_93_residues
MKHLLHYFPNHPREEECYIRLAGYREEEEIDELIYRTVGRIPGSEFLFRGNRGKRYEKKLRTSRVSHINDRYMHPLDIAI
RDRKQKEQEARKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11478; Mature: 11478

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLLHYFPNHPREEECYIRLAGYREEEEIDELIYRTVGRIPGSEFLFRGNRGKRYEKKL
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
RTSRVSHINDRYMHPLDIAIRDRKQKEQEARKY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHLLHYFPNHPREEECYIRLAGYREEEEIDELIYRTVGRIPGSEFLFRGNRGKRYEKKL
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
RTSRVSHINDRYMHPLDIAIRDRKQKEQEARKY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA