Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735525

Identifier: 187735525

GI number: 187735525

Start: 1222747

End: 1223085

Strand: Reverse

Name: 187735525

Synonym: Amuc_1030

Alternate gene names: NA

Gene position: 1223085-1222747 (Counterclockwise)

Preceding gene: 187735526

Following gene: 187735524

Centisome position: 45.91

GC content: 57.23

Gene sequence:

>339_bases
ATGGACGCCTTTTCCTCTATTCCCAATCATACGGGCTTCACGGCCAGGAACCTGTTCATGGACAGGCAGGAAATCCTGAG
AGGCGGAGCCTTCGCCAAAATAGCCCCCGGCGGCGGCGGCCCCCTTTCCCCGCACCGCCATGCCCACGCTCATTTATTCA
TTGTCACCCGTGGAACGATTTCTGTCATGCTTGACGGAGAAGAAAGAACGGTTCACGAGTACGAATCCCAGCTCGTTCCC
GGCGGCGTTCTCCATGCCGTCTGGAACAGGAATACGGAACCGGCGGAAATCCTGGGACTGACGCTGGAAACGCCTTCCTC
CCCCACATCGTCAATTTAA

Upstream 100 bases:

>100_bases
GACTGGACGGAAGCCGACCGCCTGAGGGCGGAAGTGGCAGCGCTGGGCTGGGTCATTAAAGACCGCAAGGACGGATACGA
CCTGGCACGCAAATAAACAA

Downstream 100 bases:

>100_bases
TGAGTTCCCGACAGCGCACCCTGGGCCATGCCGCCGCCCTCATGACCATTATCATCTGGGGAACCACTTTCGTCTCCACC
AAGGTGCTCTTGCGGGATTT

Product: cupin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDAFSSIPNHTGFTARNLFMDRQEILRGGAFAKIAPGGGGPLSPHRHAHAHLFIVTRGTISVMLDGEERTVHEYESQLVP
GGVLHAVWNRNTEPAEILGLTLETPSSPTSSI

Sequences:

>Translated_112_residues
MDAFSSIPNHTGFTARNLFMDRQEILRGGAFAKIAPGGGGPLSPHRHAHAHLFIVTRGTISVMLDGEERTVHEYESQLVP
GGVLHAVWNRNTEPAEILGLTLETPSSPTSSI
>Mature_112_residues
MDAFSSIPNHTGFTARNLFMDRQEILRGGAFAKIAPGGGGPLSPHRHAHAHLFIVTRGTISVMLDGEERTVHEYESQLVP
GGVLHAVWNRNTEPAEILGLTLETPSSPTSSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12083; Mature: 12083

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFSSIPNHTGFTARNLFMDRQEILRGGAFAKIAPGGGGPLSPHRHAHAHLFIVTRGTI
CCCCCCCCCCCCCCHHHHHHCHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCEE
SVMLDGEERTVHEYESQLVPGGVLHAVWNRNTEPAEILGLTLETPSSPTSSI
EEEECCCCHHHHHHHHHCCCCCEEHHHHCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDAFSSIPNHTGFTARNLFMDRQEILRGGAFAKIAPGGGGPLSPHRHAHAHLFIVTRGTI
CCCCCCCCCCCCCCHHHHHHCHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCEE
SVMLDGEERTVHEYESQLVPGGVLHAVWNRNTEPAEILGLTLETPSSPTSSI
EEEECCCCHHHHHHHHHCCCCCEEHHHHCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA