Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735492

Identifier: 187735492

GI number: 187735492

Start: 1187620

End: 1188138

Strand: Reverse

Name: 187735492

Synonym: Amuc_0995

Alternate gene names: NA

Gene position: 1188138-1187620 (Counterclockwise)

Preceding gene: 187735493

Following gene: 187735491

Centisome position: 44.6

GC content: 53.56

Gene sequence:

>519_bases
ATGAAGGCTTTTCTTGTTCCTCTCTTATATTCTGCGCTTCTGTCCGGAGCCTCTCTTGCATTTGGTGAAACGGCCGCCGG
AACGGCTTCCCCCGCAGCAGCGGCTCCGGCGGAAAAAATTCCTTCCGCGGAATCCCTGATCAACCAGGCCTTTTCCTTTG
CCATCAATATCCAGCAGACGTTGGCAGGCGTTCAGGACAAGGAAAGCGCGGACAACGCCGTCAAAACGCTGCAGGACATT
CAGAAGGACATCCGGCATTTCCTCCAGCTTCAGGATAAATTGAACGATGCGGAAAAGGAGAAAGAAGACGCCCTGATGGA
AAAAATGGAAAAACGAATGGAAATGCTGGACAACCGCTGCAGGCAGGAAGGCAAACGCCTGTTTGAGGCCCGCTATTACG
GTTCCGCCGCCTTAAAGGACATTTTGGAAAATTCGGATGAATTCAGCGACCTGGCAGAACCGGATGAAGACGGTGCGCCC
CCCGGTGCACTCCGGGAAAATGAAGAGGCCGGACAGTAG

Upstream 100 bases:

>100_bases
TTCTGGACGATGAAAAAGGCGGCATCACGGCGGAATAAGGCTCTTTTTCAGTTTCCCCTTTTTCCTTGCCGTGGATTTCA
TCCTGCCTTAAAAGAACAGG

Downstream 100 bases:

>100_bases
CCCCCCGCCCCGTTTCTCCCCCCCTTTTTTCATTCCCGGCACGCCCTTTCCCCGTATGGGTTCCTGCGCGGCCAAGTCCA
TTTCAAGCTTGCCGGAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQTLAGVQDKESADNAVKTLQDI
QKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRCRQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAP
PGALRENEEAGQ

Sequences:

>Translated_172_residues
MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQTLAGVQDKESADNAVKTLQDI
QKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRCRQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAP
PGALRENEEAGQ
>Mature_172_residues
MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQTLAGVQDKESADNAVKTLQDI
QKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRCRQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAP
PGALRENEEAGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18809; Mature: 18809

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQT
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
LAGVQDKESADNAVKTLQDIQKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRC
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAPPGALRENEEAGQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQT
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
LAGVQDKESADNAVKTLQDIQKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRC
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAPPGALRENEEAGQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA