Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735492
Identifier: 187735492
GI number: 187735492
Start: 1187620
End: 1188138
Strand: Reverse
Name: 187735492
Synonym: Amuc_0995
Alternate gene names: NA
Gene position: 1188138-1187620 (Counterclockwise)
Preceding gene: 187735493
Following gene: 187735491
Centisome position: 44.6
GC content: 53.56
Gene sequence:
>519_bases ATGAAGGCTTTTCTTGTTCCTCTCTTATATTCTGCGCTTCTGTCCGGAGCCTCTCTTGCATTTGGTGAAACGGCCGCCGG AACGGCTTCCCCCGCAGCAGCGGCTCCGGCGGAAAAAATTCCTTCCGCGGAATCCCTGATCAACCAGGCCTTTTCCTTTG CCATCAATATCCAGCAGACGTTGGCAGGCGTTCAGGACAAGGAAAGCGCGGACAACGCCGTCAAAACGCTGCAGGACATT CAGAAGGACATCCGGCATTTCCTCCAGCTTCAGGATAAATTGAACGATGCGGAAAAGGAGAAAGAAGACGCCCTGATGGA AAAAATGGAAAAACGAATGGAAATGCTGGACAACCGCTGCAGGCAGGAAGGCAAACGCCTGTTTGAGGCCCGCTATTACG GTTCCGCCGCCTTAAAGGACATTTTGGAAAATTCGGATGAATTCAGCGACCTGGCAGAACCGGATGAAGACGGTGCGCCC CCCGGTGCACTCCGGGAAAATGAAGAGGCCGGACAGTAG
Upstream 100 bases:
>100_bases TTCTGGACGATGAAAAAGGCGGCATCACGGCGGAATAAGGCTCTTTTTCAGTTTCCCCTTTTTCCTTGCCGTGGATTTCA TCCTGCCTTAAAAGAACAGG
Downstream 100 bases:
>100_bases CCCCCCGCCCCGTTTCTCCCCCCCTTTTTTCATTCCCGGCACGCCCTTTCCCCGTATGGGTTCCTGCGCGGCCAAGTCCA TTTCAAGCTTGCCGGAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQTLAGVQDKESADNAVKTLQDI QKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRCRQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAP PGALRENEEAGQ
Sequences:
>Translated_172_residues MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQTLAGVQDKESADNAVKTLQDI QKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRCRQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAP PGALRENEEAGQ >Mature_172_residues MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQTLAGVQDKESADNAVKTLQDI QKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRCRQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAP PGALRENEEAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18809; Mature: 18809
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQT CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH LAGVQDKESADNAVKTLQDIQKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRC HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAPPGALRENEEAGQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAFLVPLLYSALLSGASLAFGETAAGTASPAAAAPAEKIPSAESLINQAFSFAINIQQT CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH LAGVQDKESADNAVKTLQDIQKDIRHFLQLQDKLNDAEKEKEDALMEKMEKRMEMLDNRC HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQEGKRLFEARYYGSAALKDILENSDEFSDLAEPDEDGAPPGALRENEEAGQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA