Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735477
Identifier: 187735477
GI number: 187735477
Start: 1165850
End: 1166419
Strand: Direct
Name: 187735477
Synonym: Amuc_0976
Alternate gene names: NA
Gene position: 1165850-1166419 (Clockwise)
Preceding gene: 187735476
Following gene: 187735478
Centisome position: 43.76
GC content: 51.05
Gene sequence:
>570_bases ATGGAAAGCCTTTCCGCCTTTTCTTCCATGAGCGACCTGCCTTCCTTTTCCCGTGACGATATCCGCTATGCGGCGGAGAT GACACGGGTGGTGTATGAACCGGACCGCCGCATTGATACTTTTGGCGATACCAGGTTTAATTTTCTTCTCCTCAGCGAAC TGATGGATGAGGTGAACGTGGTGCGCGTGCGCAGCGGCTGGGTGGAAGCGGAGAAACCGAAAATCATACGGCCTTCCATT TACAATGAAATCAGTACGGAGGGGTTTTCCGGAGAAGCCAAGCGCTTTTTTGACTGGCTCTCCAAAAACGGGCCAGGCTT TTTGACGTTGCTGGAATACGGGTTCAGGTTCAAACGGTCGGAGGTGAGCGAGGAAATTCTGCATGAACCGCTTGATTCCG TGCGCGGCCGGCTGCTGGACCAGGTGCGCAATGGAGAAGATACATTTATGGCTCTCATTGAGGGAGTGGATGACGCATGG GAGGTCTCCCTCTTGAAATTCACGGTGGAAATGATACAAAAATCCCATGAAATCAATATCTTTGACTTCAAGCGCAAAGG TCTTCTTTAG
Upstream 100 bases:
>100_bases TCGTTGCTTACATCGAAAAGGTTCAGGGTTAAGTTAAACTGCTAAAAATCCTTTATTACAAAAGCGGCTTCCCTGTCCAA GGCAAGGAAGCCGCTTTTTC
Downstream 100 bases:
>100_bases CCTTTTGGCGGCGGCTTTCTGTGTCCAGGGAGTTTTGGCGGACGGAGAAAATTATTCCCTCTGGCCGCGCCGTCCGGAGG CCCTTGCTGAAGCCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MESLSAFSSMSDLPSFSRDDIRYAAEMTRVVYEPDRRIDTFGDTRFNFLLLSELMDEVNVVRVRSGWVEAEKPKIIRPSI YNEISTEGFSGEAKRFFDWLSKNGPGFLTLLEYGFRFKRSEVSEEILHEPLDSVRGRLLDQVRNGEDTFMALIEGVDDAW EVSLLKFTVEMIQKSHEINIFDFKRKGLL
Sequences:
>Translated_189_residues MESLSAFSSMSDLPSFSRDDIRYAAEMTRVVYEPDRRIDTFGDTRFNFLLLSELMDEVNVVRVRSGWVEAEKPKIIRPSI YNEISTEGFSGEAKRFFDWLSKNGPGFLTLLEYGFRFKRSEVSEEILHEPLDSVRGRLLDQVRNGEDTFMALIEGVDDAW EVSLLKFTVEMIQKSHEINIFDFKRKGLL >Mature_189_residues MESLSAFSSMSDLPSFSRDDIRYAAEMTRVVYEPDRRIDTFGDTRFNFLLLSELMDEVNVVRVRSGWVEAEKPKIIRPSI YNEISTEGFSGEAKRFFDWLSKNGPGFLTLLEYGFRFKRSEVSEEILHEPLDSVRGRLLDQVRNGEDTFMALIEGVDDAW EVSLLKFTVEMIQKSHEINIFDFKRKGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21952; Mature: 21952
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLSAFSSMSDLPSFSRDDIRYAAEMTRVVYEPDRRIDTFGDTRFNFLLLSELMDEVNV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHE VRVRSGWVEAEKPKIIRPSIYNEISTEGFSGEAKRFFDWLSKNGPGFLTLLEYGFRFKRS EEECCCCCCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EVSEEILHEPLDSVRGRLLDQVRNGEDTFMALIEGVDDAWEVSLLKFTVEMIQKSHEINI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCE FDFKRKGLL EECCCCCCC >Mature Secondary Structure MESLSAFSSMSDLPSFSRDDIRYAAEMTRVVYEPDRRIDTFGDTRFNFLLLSELMDEVNV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHE VRVRSGWVEAEKPKIIRPSIYNEISTEGFSGEAKRFFDWLSKNGPGFLTLLEYGFRFKRS EEECCCCCCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EVSEEILHEPLDSVRGRLLDQVRNGEDTFMALIEGVDDAWEVSLLKFTVEMIQKSHEINI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCE FDFKRKGLL EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA