Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is sglT [H]
Identifier: 187735471
GI number: 187735471
Start: 1157874
End: 1160171
Strand: Direct
Name: sglT [H]
Synonym: Amuc_0970
Alternate gene names: 187735471
Gene position: 1157874-1160171 (Clockwise)
Preceding gene: 187735470
Following gene: 187735474
Centisome position: 43.46
GC content: 58.96
Gene sequence:
>2298_bases ATGATGAAAACACTAGCAACCATATTCGGGGCGCTCGCCCTGATGACGTGGGGCGCAGCTGCCCAGGAGGGTCCCGTACC TGCAACGGCGGCTGATGCGCAGCCCGCCTTGGCCGCTCCGGCCGCGATTCCCGCTGTTGAAGTCCAGCCGGCAGCGGAAA TTCAGCCGGCGGCTCCCGCCGCAGAGGCAGTACAGGCTGAACAGACCGCCTCTGCGGAGCCTAAAACGGCCCCTCTTTCC ATGGTGGAAGTCATTCTCTTCTGCGTGGTCGTGGTGGGCGTGATCGCCCTGGGCATCTGGAAGAGCCGTGACCCCGAAGA AACGGAAGAGGAAAAGAAGGCCAAGGGCGCTTCAGACTATTTCCTTGCCGGCCGCGGTTTGACCTGGTGGCTGGTGGGTT TCTCCCTGATTGCCGCCAACATTTCCACGGAACAGTTTGTGGGGATGTCCGGCAAATCGGCCAACTGGGTGGGCATGGCC ATTGCCGGGTATGAATGGCTGGCCGCTATCACGCTGGTGGTTGTAGCCTTCTGCTTCCTCCCCAAGCTGTTGAAAGGCGG CGTATATACGATTCCCGAATTCCTGGAATACCGGTATAACACGCTGGCCCGTTCCCTGATGGCCATTGCTACGCTGCTGA TTCTGGTAGGCGTGCCGACTGCGGGCGTGATTTACGCCGGCGCCAAGGTGATTTCCGTGTTCTTCACGGGATACTCTGCC ATGGGCATTGACTTCGGCGACATCACCGTCGGCTGCGTTATCATTGCCTTCTGCGCCACGGTATACGTGTTCGTGGGCGG GTTGAAAGCCTGCGCCTGGACGGACCTGTTCTGGGGCGCCGCCCTGATTGTGGGCGGCGGCGTGGTGGCCTATTTTGCCC TGACGGAGCTCAGCGGCGCAGACCCGAACCATTTGATTCAATCCGCCGCCGCCAATTCCGGCGCGACGGTCGCCTCCCTG GGGAATCCTTCGGACAGCCTCTGGCATGGGGTGACGCGCTTTTTTGAGCTGAACTCCGGTGACGCGGCCAGCGGCGTAAA TACCGTGGGCGGCAAGCTGCACATGATCCGTCCTGCGGATGATGCGGAAATCCCGTGGACGGCTCTTTGCCTGGGCCTGT GGATTCCCAACTTCTTTTACTGGGGCCTCAACCAGTACATCATGCAGCGTACGCTGGCTTCCAAATCCCTGGCGGAAGGT CAGATGGGCATTGTGTTCGCCGCATTCCTCAAGCTCATCATCCCATTCGTGGTGGTGGTCCCCGGCATCCTGGCCTATAA CCTGTACCGCAATGACCTGAAGGAACAGGCGGAAGTAAAATACGCGGCGGAAATCCGTAAGACGGAAGATCCCGCCGCAG TCAAGGGCCGCCCCGTCATCTACAAGCTTACGGACAGCTTCCTGGTGGAAAACGTGGAGGAAGGCTGTGCCCATGCCATT CATAACGCGGAAGTAATGAAGGTGGGCGAAGATGTTATGGCCAATTTGAAACAGGCCTGCGCCGATTTGAAGGCGGATGC CGCCAACGACCAGACTACGCTGGCGGAACGCGCCCCGTTCGTGGAAAAAATCGCTTCCCTTAACAACAAAATCATCAAGC CGGCCGTGGACAACTCGGATAACTACTATCTGACGGATACGCTGGTAGGCTTTGACTATGACTCCGCCTTCGGCACGTTG ATCAGGAAGTTGCTTCCCGGCACGGGCTGGACATGGTTTGTGCTTGCGGCCCTCTTTGGAGCGGTGGTGTCTTCCCTGGC ATCCATGTTGAATTCCGCGTCCACCATCTTTACGATGGATATTTACAACAAGCTGCGCAAAAATGCGGGGCCCACGGAGC TGGTTACCGTCGGCAAGATTGGTTTGCTGGTGTGCGCCGTGATCGCCCTGACCATTGCTCCGTTCCTGGACAGCCCGGCC TTTGGCGGCATCTTCAACTTCATTCAGGAATTCCAGGGCTTCCTGAGCCCGGGCGCCCTGTGCGTGTTCCTCTTCGGCTT CTTTGTGCCCAAGTGCCCGCGCATCTTCGGTTGGCTGGGTATCGTCATTAATGCCCTCCTGTACGGAATCCTGAAGGTAT GGCAGCCGGAAATGGCCTTCCTGAACCGCATGGCCGTGTGTTTCATCACGGTAGTGGTCATCGGCTTCATCTTCACGGCG GTGAACGCCGCCCGCGGCGGACAGCCTATCGTGCTGCCCGACAGGGGCGTGGTTGCCCTTCAGTCCTCTTCACGGGCTAA AATCTTCGGATGGCTCGTGGTTGCCGCGACGGTTGCCCTGTACATCATCTTCTGGTAA
Upstream 100 bases:
>100_bases TCTGGACGGCTACTGCCAGGAAACGGGCATTGAAACTACGTATCTTGTAACCCGTGCCGGAGAAGGCGCCCGTGTTTTGT ACCAAGCTTAATCCATACTG
Downstream 100 bases:
>100_bases TTCAGGGAAGACCTCCAGTCCCGTATTTTCAATCCTCCCGGTTCAGGCCGGGAGGATTTTTCACGTCCGGAACAGACCAT GCAGCTGGCGCGGCTGAATA
Product: SSS sodium solute transporter superfamily
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MMKTLATIFGALALMTWGAAAQEGPVPATAADAQPALAAPAAIPAVEVQPAAEIQPAAPAAEAVQAEQTASAEPKTAPLS MVEVILFCVVVVGVIALGIWKSRDPEETEEEKKAKGASDYFLAGRGLTWWLVGFSLIAANISTEQFVGMSGKSANWVGMA IAGYEWLAAITLVVVAFCFLPKLLKGGVYTIPEFLEYRYNTLARSLMAIATLLILVGVPTAGVIYAGAKVISVFFTGYSA MGIDFGDITVGCVIIAFCATVYVFVGGLKACAWTDLFWGAALIVGGGVVAYFALTELSGADPNHLIQSAAANSGATVASL GNPSDSLWHGVTRFFELNSGDAASGVNTVGGKLHMIRPADDAEIPWTALCLGLWIPNFFYWGLNQYIMQRTLASKSLAEG QMGIVFAAFLKLIIPFVVVVPGILAYNLYRNDLKEQAEVKYAAEIRKTEDPAAVKGRPVIYKLTDSFLVENVEEGCAHAI HNAEVMKVGEDVMANLKQACADLKADAANDQTTLAERAPFVEKIASLNNKIIKPAVDNSDNYYLTDTLVGFDYDSAFGTL IRKLLPGTGWTWFVLAALFGAVVSSLASMLNSASTIFTMDIYNKLRKNAGPTELVTVGKIGLLVCAVIALTIAPFLDSPA FGGIFNFIQEFQGFLSPGALCVFLFGFFVPKCPRIFGWLGIVINALLYGILKVWQPEMAFLNRMAVCFITVVVIGFIFTA VNAARGGQPIVLPDRGVVALQSSSRAKIFGWLVVAATVALYIIFW
Sequences:
>Translated_765_residues MMKTLATIFGALALMTWGAAAQEGPVPATAADAQPALAAPAAIPAVEVQPAAEIQPAAPAAEAVQAEQTASAEPKTAPLS MVEVILFCVVVVGVIALGIWKSRDPEETEEEKKAKGASDYFLAGRGLTWWLVGFSLIAANISTEQFVGMSGKSANWVGMA IAGYEWLAAITLVVVAFCFLPKLLKGGVYTIPEFLEYRYNTLARSLMAIATLLILVGVPTAGVIYAGAKVISVFFTGYSA MGIDFGDITVGCVIIAFCATVYVFVGGLKACAWTDLFWGAALIVGGGVVAYFALTELSGADPNHLIQSAAANSGATVASL GNPSDSLWHGVTRFFELNSGDAASGVNTVGGKLHMIRPADDAEIPWTALCLGLWIPNFFYWGLNQYIMQRTLASKSLAEG QMGIVFAAFLKLIIPFVVVVPGILAYNLYRNDLKEQAEVKYAAEIRKTEDPAAVKGRPVIYKLTDSFLVENVEEGCAHAI HNAEVMKVGEDVMANLKQACADLKADAANDQTTLAERAPFVEKIASLNNKIIKPAVDNSDNYYLTDTLVGFDYDSAFGTL IRKLLPGTGWTWFVLAALFGAVVSSLASMLNSASTIFTMDIYNKLRKNAGPTELVTVGKIGLLVCAVIALTIAPFLDSPA FGGIFNFIQEFQGFLSPGALCVFLFGFFVPKCPRIFGWLGIVINALLYGILKVWQPEMAFLNRMAVCFITVVVIGFIFTA VNAARGGQPIVLPDRGVVALQSSSRAKIFGWLVVAATVALYIIFW >Mature_765_residues MMKTLATIFGALALMTWGAAAQEGPVPATAADAQPALAAPAAIPAVEVQPAAEIQPAAPAAEAVQAEQTASAEPKTAPLS MVEVILFCVVVVGVIALGIWKSRDPEETEEEKKAKGASDYFLAGRGLTWWLVGFSLIAANISTEQFVGMSGKSANWVGMA IAGYEWLAAITLVVVAFCFLPKLLKGGVYTIPEFLEYRYNTLARSLMAIATLLILVGVPTAGVIYAGAKVISVFFTGYSA MGIDFGDITVGCVIIAFCATVYVFVGGLKACAWTDLFWGAALIVGGGVVAYFALTELSGADPNHLIQSAAANSGATVASL GNPSDSLWHGVTRFFELNSGDAASGVNTVGGKLHMIRPADDAEIPWTALCLGLWIPNFFYWGLNQYIMQRTLASKSLAEG QMGIVFAAFLKLIIPFVVVVPGILAYNLYRNDLKEQAEVKYAAEIRKTEDPAAVKGRPVIYKLTDSFLVENVEEGCAHAI HNAEVMKVGEDVMANLKQACADLKADAANDQTTLAERAPFVEKIASLNNKIIKPAVDNSDNYYLTDTLVGFDYDSAFGTL IRKLLPGTGWTWFVLAALFGAVVSSLASMLNSASTIFTMDIYNKLRKNAGPTELVTVGKIGLLVCAVIALTIAPFLDSPA FGGIFNFIQEFQGFLSPGALCVFLFGFFVPKCPRIFGWLGIVINALLYGILKVWQPEMAFLNRMAVCFITVVVIGFIFTA VNAARGGQPIVLPDRGVVALQSSSRAKIFGWLVVAATVALYIIFW
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG4146
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=373, Percent_Identity=27.0777479892761, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI17941285, Length=382, Percent_Identity=25.9162303664921, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI4507033, Length=343, Percent_Identity=27.9883381924198, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI110835708, Length=362, Percent_Identity=26.5193370165746, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI4507031, Length=315, Percent_Identity=28.8888888888889, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI109659839, Length=425, Percent_Identity=25.6470588235294, Blast_Score=110, Evalue=8e-24, Organism=Homo sapiens, GI109659836, Length=370, Percent_Identity=27.2972972972973, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI206597483, Length=340, Percent_Identity=27.6470588235294, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI206597487, Length=369, Percent_Identity=24.390243902439, Blast_Score=93, Evalue=1e-18, Organism=Escherichia coli, GI1790113, Length=336, Percent_Identity=33.6309523809524, Blast_Score=161, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 81669; Mature: 81669
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTLATIFGALALMTWGAAAQEGPVPATAADAQPALAAPAAIPAVEVQPAAEIQPAAPA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCH AEAVQAEQTASAEPKTAPLSMVEVILFCVVVVGVIALGIWKSRDPEETEEEKKAKGASDY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCE FLAGRGLTWWLVGFSLIAANISTEQFVGMSGKSANWVGMAIAGYEWLAAITLVVVAFCFL EEECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH PKLLKGGVYTIPEFLEYRYNTLARSLMAIATLLILVGVPTAGVIYAGAKVISVFFTGYSA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH MGIDFGDITVGCVIIAFCATVYVFVGGLKACAWTDLFWGAALIVGGGVVAYFALTELSGA CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC DPNHLIQSAAANSGATVASLGNPSDSLWHGVTRFFELNSGDAASGVNTVGGKLHMIRPAD CHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCEEEEECCCC DAEIPWTALCLGLWIPNFFYWGLNQYIMQRTLASKSLAEGQMGIVFAAFLKLIIPFVVVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH PGILAYNLYRNDLKEQAEVKYAAEIRKTEDPAAVKGRPVIYKLTDSFLVENVEEGCAHAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH HNAEVMKVGEDVMANLKQACADLKADAANDQTTLAERAPFVEKIASLNNKIIKPAVDNSD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCEECCCCCCCC NYYLTDTLVGFDYDSAFGTLIRKLLPGTGWTWFVLAALFGAVVSSLASMLNSASTIFTMD CEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHH IYNKLRKNAGPTELVTVGKIGLLVCAVIALTIAPFLDSPAFGGIFNFIQEFQGFLSPGAL HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH CVFLFGFFVPKCPRIFGWLGIVINALLYGILKVWQPEMAFLNRMAVCFITVVVIGFIFTA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VNAARGGQPIVLPDRGVVALQSSSRAKIFGWLVVAATVALYIIFW HHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMKTLATIFGALALMTWGAAAQEGPVPATAADAQPALAAPAAIPAVEVQPAAEIQPAAPA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCH AEAVQAEQTASAEPKTAPLSMVEVILFCVVVVGVIALGIWKSRDPEETEEEKKAKGASDY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCE FLAGRGLTWWLVGFSLIAANISTEQFVGMSGKSANWVGMAIAGYEWLAAITLVVVAFCFL EEECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH PKLLKGGVYTIPEFLEYRYNTLARSLMAIATLLILVGVPTAGVIYAGAKVISVFFTGYSA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH MGIDFGDITVGCVIIAFCATVYVFVGGLKACAWTDLFWGAALIVGGGVVAYFALTELSGA CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC DPNHLIQSAAANSGATVASLGNPSDSLWHGVTRFFELNSGDAASGVNTVGGKLHMIRPAD CHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCEEEEECCCC DAEIPWTALCLGLWIPNFFYWGLNQYIMQRTLASKSLAEGQMGIVFAAFLKLIIPFVVVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH PGILAYNLYRNDLKEQAEVKYAAEIRKTEDPAAVKGRPVIYKLTDSFLVENVEEGCAHAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH HNAEVMKVGEDVMANLKQACADLKADAANDQTTLAERAPFVEKIASLNNKIIKPAVDNSD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCEECCCCCCCC NYYLTDTLVGFDYDSAFGTLIRKLLPGTGWTWFVLAALFGAVVSSLASMLNSASTIFTMD CEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHH IYNKLRKNAGPTELVTVGKIGLLVCAVIALTIAPFLDSPAFGGIFNFIQEFQGFLSPGAL HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH CVFLFGFFVPKCPRIFGWLGIVINALLYGILKVWQPEMAFLNRMAVCFITVVVIGFIFTA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VNAARGGQPIVLPDRGVVALQSSSRAKIFGWLVVAATVALYIIFW HHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]