Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735467

Identifier: 187735467

GI number: 187735467

Start: 1153070

End: 1153816

Strand: Direct

Name: 187735467

Synonym: Amuc_0966

Alternate gene names: NA

Gene position: 1153070-1153816 (Clockwise)

Preceding gene: 187735466

Following gene: 187735469

Centisome position: 43.28

GC content: 60.11

Gene sequence:

>747_bases
ATGCTACGGCTCATGAAGGCAGTATACCTGTGTTTGTGCATGCTGGCGGCGTTCTGTTTTCCGGCCGCGGCGCTCCCTGC
GGATTGCAGCCAGGTGATTGTAGGTTCCGCGGACGGGTGGAATAGTTCCCATGTGCAGTTGAGCCTTTTGGAGAAGGGGC
CGCGGGGCTGGGTGATGGTGAAGGGGCCGTTTCCGGCGCGTCTGGGAAAATCCGGTCTGGTCTGGGGCAGGGGCGTCAGC
CTCCCTCCCGCCGGAGGGCCGGTGAAGAAGGAGGGGGACTTGCGCTCTCCCGCGGGAATTTTTGAACTGGGGGGCGTATA
TGGAACTGTTCCCGCGCCGCAGAAAAAGCGTTCCATGCCGTACCGCCGCATTACGCCGCGGGACATGTGGGTGGATGACC
CTGCTTCTCCCCTGTATAACCAGCACTTTGTGCTGAAGCATGATCCCGTCACGCCTTGGGAGTTCAAGCAGCAGATGAAG
CTGAATGATTACGCCCACAGTCTGAAACTGTTTATCCGGCATAATGCCGCAGACGGACGGCAGAAACCCGTGCCGGGTGC
GGGTTCCTCCATTTTTTTCCATATCTGGCGCCGGGACGGAGGAGCCCCTACGGCCGGATGCACCGCGATGAGCGAGGAAA
ATTTGAGGGCCATGATTGCATGGCTGGATCCTTCCAGACACCCCCTTTATATTCTGCTCCCCGCCAGGGAATATTTGCGC
CTGCGCAGAGCCTGGGGGCTGCCGTGA

Upstream 100 bases:

>100_bases
TGCTGGAAGAAGTTCTTCCGTTGAACTAGGCGGGTGGATTCCGCCGGACGGCGCGCCTGCGGAGACGGAGTAATTGCTTT
TCTTCCGGAACGGTGCCGTT

Downstream 100 bases:

>100_bases
TATTTTCAGAATCCGCCTTTGCAGGCACGCCTGTTCCGCCGCCCCGGGACGGACAGGGGAGTGGTTTAAACCCTACGGAT
GGAAGGGCTGTTGGATGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; S-Layer Homology And Secreted GW Repeat Fusion Protein; S-Layer Domain Protein; SH3 Domain-Containing Protein; Lipoprotein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLRLMKAVYLCLCMLAAFCFPAAALPADCSQVIVGSADGWNSSHVQLSLLEKGPRGWVMVKGPFPARLGKSGLVWGRGVS
LPPAGGPVKKEGDLRSPAGIFELGGVYGTVPAPQKKRSMPYRRITPRDMWVDDPASPLYNQHFVLKHDPVTPWEFKQQMK
LNDYAHSLKLFIRHNAADGRQKPVPGAGSSIFFHIWRRDGGAPTAGCTAMSEENLRAMIAWLDPSRHPLYILLPAREYLR
LRRAWGLP

Sequences:

>Translated_248_residues
MLRLMKAVYLCLCMLAAFCFPAAALPADCSQVIVGSADGWNSSHVQLSLLEKGPRGWVMVKGPFPARLGKSGLVWGRGVS
LPPAGGPVKKEGDLRSPAGIFELGGVYGTVPAPQKKRSMPYRRITPRDMWVDDPASPLYNQHFVLKHDPVTPWEFKQQMK
LNDYAHSLKLFIRHNAADGRQKPVPGAGSSIFFHIWRRDGGAPTAGCTAMSEENLRAMIAWLDPSRHPLYILLPAREYLR
LRRAWGLP
>Mature_248_residues
MLRLMKAVYLCLCMLAAFCFPAAALPADCSQVIVGSADGWNSSHVQLSLLEKGPRGWVMVKGPFPARLGKSGLVWGRGVS
LPPAGGPVKKEGDLRSPAGIFELGGVYGTVPAPQKKRSMPYRRITPRDMWVDDPASPLYNQHFVLKHDPVTPWEFKQQMK
LNDYAHSLKLFIRHNAADGRQKPVPGAGSSIFFHIWRRDGGAPTAGCTAMSEENLRAMIAWLDPSRHPLYILLPAREYLR
LRRAWGLP

Specific function: Unknown

COG id: COG3786

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27510; Mature: 27510

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLMKAVYLCLCMLAAFCFPAAALPADCSQVIVGSADGWNSSHVQLSLLEKGPRGWVMV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEE
KGPFPARLGKSGLVWGRGVSLPPAGGPVKKEGDLRSPAGIFELGGVYGTVPAPQKKRSMP
ECCCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCHHHHCCC
YRRITPRDMWVDDPASPLYNQHFVLKHDPVTPWEFKQQMKLNDYAHSLKLFIRHNAADGR
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCC
QKPVPGAGSSIFFHIWRRDGGAPTAGCTAMSEENLRAMIAWLDPSRHPLYILLPAREYLR
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHH
LRRAWGLP
HHHHCCCC
>Mature Secondary Structure
MLRLMKAVYLCLCMLAAFCFPAAALPADCSQVIVGSADGWNSSHVQLSLLEKGPRGWVMV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEE
KGPFPARLGKSGLVWGRGVSLPPAGGPVKKEGDLRSPAGIFELGGVYGTVPAPQKKRSMP
ECCCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCHHHHCCC
YRRITPRDMWVDDPASPLYNQHFVLKHDPVTPWEFKQQMKLNDYAHSLKLFIRHNAADGR
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCC
QKPVPGAGSSIFFHIWRRDGGAPTAGCTAMSEENLRAMIAWLDPSRHPLYILLPAREYLR
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHH
LRRAWGLP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA