Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735466
Identifier: 187735466
GI number: 187735466
Start: 1151124
End: 1152998
Strand: Direct
Name: 187735466
Synonym: Amuc_0965
Alternate gene names: NA
Gene position: 1151124-1152998 (Clockwise)
Preceding gene: 187735465
Following gene: 187735467
Centisome position: 43.21
GC content: 55.41
Gene sequence:
>1875_bases ATGACCCTGGCCTGCGCGGTTCCCGCCCTGGGGCAGATGATGTACAACCCTCCTGCAGCCGGCGGTGCGCCTGCCGCGTC CCCTGCCTCCCCTCCCGCCGTTCAGCCGAATGCCTACCAGCCTTCCAGGCAGGGGGATGCCAAGTCCCTGTACGGCAATG AGCTTCCTTTCCTGAACCCTCAGGACGGCACGGTGACCATCAACGGAACGACGTTGAATATGGGCAGTTTCCGGGAGATT GAAGCGCGTTTCAACAAGTACCTGAGCCAGCCGGAGGAAAGTACGGAAGATGCGAAGGAATATCAGAAAATTTTTGAAAA GCTCCACGAAACGCTCTCCATGCGCAAGGAAAAACTGGTGGCGGATAATGTGGTGCGGCAGGTAGTGGACCTGTTGACCA CCGCTTCCAGCAACCCGCTGGACGGAGGCGTTTCCGACGCTCTCTGCCAGGCCATTTACACCGCGTGGCAGGCCAGGAGC AATGGAAAAAACAAGGGGAAGATGCTTGAGGCGGTGGAGAGGGAAATCCGCAGCAACGCCCAGAAGATGAGCCTGATGGA AAGCGGCGTGACGACGATTTCCGGTGCGCCCTCCGGCCAGAAGGGCGGGAAAAAGGGAACTTCCACCAATCATCCCGCCA AAAATAACCCCCGTTACAAATATCTGGAAAAGCGTGTAGTGGAGATGGAAGCCCGCAAGCTGAAGCTGGAAAGTGAACAG GTTCTGACGGTGACGGAAGCGAAGATTGTTTTTCAGTCTACGCTGGTTCAATTGTTTGCCCAGCGGCGTTTTGACCATGT TTCCATAGGCTGCGGCGTTTACAGCCGCCTGTTCAATGACGGGGATACCAAGCTGCGGCTGGATAAGAATTCCGATGCCG CCAAGATGTTCAGCGGTACGCTGGGCGCTCCTCCCACCGTCGCTATTCTGGACAACCTTTCCCGGGAACTGGCCCGTGAC TCCGACCGGCACATGAAGGCCGTGAACAACCTGGTGGATTCCCATCATTACGTGGATGCGCTGGAACGGCTGAACGAAGC TCTCCTGATCGGGGAATTCATGCCTGCCGTGAATACGTTTCCGTATGAGAAGAAGCAAAAACTGTATGCCTTCAAACGGG ACGTGGAAAAGTTGTTCGAGTTGATGAACGGCAAAGATTACGAAGAAGCCCTTTCCCTGGTGGAGAACCTTAAGAAGACT TCCAGGGATTTCAGTACGGGCCGTGCGGAGTCCGCTATCAGCGCCGCCGTATTCGCCAGTGACGCCTATATTTCCCAGGG GCAGGAAGCCCTGGCCAGGGGGGACCGCGCCAAATTGGAGGAATGCCTGAAAAGCGCCATTGAAATCTGGCCGAAGAATC CCCGTCTTCTTCCGCTGCGGAACGCCATGATGGCCGCAGGTCAGCAATCCCACGCTCTGGAGGATTTCAAGCGTTTCCAC AAGAATAAGAATTATCGCCGCATTTTTGACAACCAGCATGAATTTGCCGTTCTGGTGAAGGATGATCCGGAGCTCCAGAA GCAGTTTGTGGAAGATCTGGGCAAAATGGCCGTTATTGAGCGTGCCTTGGGCGCAGCGCGCCAGCGTGAAGCCATGCAGG ACGTATACGGCGCCTGGGAGGAGCTTCAACAGCTGCGTTCCAGGGACCAGGAACTGTTCATCAATGACCAGGAGCTGAAT GCCCGGTATTTGGACCTGACGACAAAGGCAAGCACACTGGTAAATCTGCTGAATGATGCGGAAAAATGCAGGAATGCGGG AGAAGTGGGGTCTGCCCTGGGTAAATACATGGAAGCCAAAAGGCTGTATCTGTATTCCCGGTTTGCCAAGGAGGGAATTG AGTCCCTGCTGGAAGAAGTTCTTCCGTTGAACTAG
Upstream 100 bases:
>100_bases GGGTGAAAGATATCAATCCGAAGGTGCGCGGCGTGTGCGTAGCTACATCCATTCAGCCTAAATAAACAATCTCCCTCGTC CTATGAAATGCTGTTTTTTG
Downstream 100 bases:
>100_bases GCGGGTGGATTCCGCCGGACGGCGCGCCTGCGGAGACGGAGTAATTGCTTTTCTTCCGGAACGGTGCCGTTATGCTACGG CTCATGAAGGCAGTATACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MTLACAVPALGQMMYNPPAAGGAPAASPASPPAVQPNAYQPSRQGDAKSLYGNELPFLNPQDGTVTINGTTLNMGSFREI EARFNKYLSQPEESTEDAKEYQKIFEKLHETLSMRKEKLVADNVVRQVVDLLTTASSNPLDGGVSDALCQAIYTAWQARS NGKNKGKMLEAVEREIRSNAQKMSLMESGVTTISGAPSGQKGGKKGTSTNHPAKNNPRYKYLEKRVVEMEARKLKLESEQ VLTVTEAKIVFQSTLVQLFAQRRFDHVSIGCGVYSRLFNDGDTKLRLDKNSDAAKMFSGTLGAPPTVAILDNLSRELARD SDRHMKAVNNLVDSHHYVDALERLNEALLIGEFMPAVNTFPYEKKQKLYAFKRDVEKLFELMNGKDYEEALSLVENLKKT SRDFSTGRAESAISAAVFASDAYISQGQEALARGDRAKLEECLKSAIEIWPKNPRLLPLRNAMMAAGQQSHALEDFKRFH KNKNYRRIFDNQHEFAVLVKDDPELQKQFVEDLGKMAVIERALGAARQREAMQDVYGAWEELQQLRSRDQELFINDQELN ARYLDLTTKASTLVNLLNDAEKCRNAGEVGSALGKYMEAKRLYLYSRFAKEGIESLLEEVLPLN
Sequences:
>Translated_624_residues MTLACAVPALGQMMYNPPAAGGAPAASPASPPAVQPNAYQPSRQGDAKSLYGNELPFLNPQDGTVTINGTTLNMGSFREI EARFNKYLSQPEESTEDAKEYQKIFEKLHETLSMRKEKLVADNVVRQVVDLLTTASSNPLDGGVSDALCQAIYTAWQARS NGKNKGKMLEAVEREIRSNAQKMSLMESGVTTISGAPSGQKGGKKGTSTNHPAKNNPRYKYLEKRVVEMEARKLKLESEQ VLTVTEAKIVFQSTLVQLFAQRRFDHVSIGCGVYSRLFNDGDTKLRLDKNSDAAKMFSGTLGAPPTVAILDNLSRELARD SDRHMKAVNNLVDSHHYVDALERLNEALLIGEFMPAVNTFPYEKKQKLYAFKRDVEKLFELMNGKDYEEALSLVENLKKT SRDFSTGRAESAISAAVFASDAYISQGQEALARGDRAKLEECLKSAIEIWPKNPRLLPLRNAMMAAGQQSHALEDFKRFH KNKNYRRIFDNQHEFAVLVKDDPELQKQFVEDLGKMAVIERALGAARQREAMQDVYGAWEELQQLRSRDQELFINDQELN ARYLDLTTKASTLVNLLNDAEKCRNAGEVGSALGKYMEAKRLYLYSRFAKEGIESLLEEVLPLN >Mature_623_residues TLACAVPALGQMMYNPPAAGGAPAASPASPPAVQPNAYQPSRQGDAKSLYGNELPFLNPQDGTVTINGTTLNMGSFREIE ARFNKYLSQPEESTEDAKEYQKIFEKLHETLSMRKEKLVADNVVRQVVDLLTTASSNPLDGGVSDALCQAIYTAWQARSN GKNKGKMLEAVEREIRSNAQKMSLMESGVTTISGAPSGQKGGKKGTSTNHPAKNNPRYKYLEKRVVEMEARKLKLESEQV LTVTEAKIVFQSTLVQLFAQRRFDHVSIGCGVYSRLFNDGDTKLRLDKNSDAAKMFSGTLGAPPTVAILDNLSRELARDS DRHMKAVNNLVDSHHYVDALERLNEALLIGEFMPAVNTFPYEKKQKLYAFKRDVEKLFELMNGKDYEEALSLVENLKKTS RDFSTGRAESAISAAVFASDAYISQGQEALARGDRAKLEECLKSAIEIWPKNPRLLPLRNAMMAAGQQSHALEDFKRFHK NKNYRRIFDNQHEFAVLVKDDPELQKQFVEDLGKMAVIERALGAARQREAMQDVYGAWEELQQLRSRDQELFINDQELNA RYLDLTTKASTLVNLLNDAEKCRNAGEVGSALGKYMEAKRLYLYSRFAKEGIESLLEEVLPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69716; Mature: 69585
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLACAVPALGQMMYNPPAAGGAPAASPASPPAVQPNAYQPSRQGDAKSLYGNELPFLNP CCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC QDGTVTINGTTLNMGSFREIEARFNKYLSQPEESTEDAKEYQKIFEKLHETLSMRKEKLV CCCEEEEECEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADNVVRQVVDLLTTASSNPLDGGVSDALCQAIYTAWQARSNGKNKGKMLEAVEREIRSNA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QKMSLMESGVTTISGAPSGQKGGKKGTSTNHPAKNNPRYKYLEKRVVEMEARKLKLESEQ HHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC VLTVTEAKIVFQSTLVQLFAQRRFDHVSIGCGVYSRLFNDGDTKLRLDKNSDAAKMFSGT EEEHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCHHHHHHCC LGAPPTVAILDNLSRELARDSDRHMKAVNNLVDSHHYVDALERLNEALLIGEFMPAVNTF CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYEKKQKLYAFKRDVEKLFELMNGKDYEEALSLVENLKKTSRDFSTGRAESAISAAVFAS CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DAYISQGQEALARGDRAKLEECLKSAIEIWPKNPRLLPLRNAMMAAGQQSHALEDFKRFH HHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHH KNKNYRRIFDNQHEFAVLVKDDPELQKQFVEDLGKMAVIERALGAARQREAMQDVYGAWE CCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELQQLRSRDQELFINDQELNARYLDLTTKASTLVNLLNDAEKCRNAGEVGSALGKYMEAK HHHHHHCCCHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH RLYLYSRFAKEGIESLLEEVLPLN HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLACAVPALGQMMYNPPAAGGAPAASPASPPAVQPNAYQPSRQGDAKSLYGNELPFLNP CEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC QDGTVTINGTTLNMGSFREIEARFNKYLSQPEESTEDAKEYQKIFEKLHETLSMRKEKLV CCCEEEEECEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADNVVRQVVDLLTTASSNPLDGGVSDALCQAIYTAWQARSNGKNKGKMLEAVEREIRSNA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QKMSLMESGVTTISGAPSGQKGGKKGTSTNHPAKNNPRYKYLEKRVVEMEARKLKLESEQ HHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC VLTVTEAKIVFQSTLVQLFAQRRFDHVSIGCGVYSRLFNDGDTKLRLDKNSDAAKMFSGT EEEHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCHHHHHHCC LGAPPTVAILDNLSRELARDSDRHMKAVNNLVDSHHYVDALERLNEALLIGEFMPAVNTF CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYEKKQKLYAFKRDVEKLFELMNGKDYEEALSLVENLKKTSRDFSTGRAESAISAAVFAS CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DAYISQGQEALARGDRAKLEECLKSAIEIWPKNPRLLPLRNAMMAAGQQSHALEDFKRFH HHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHH KNKNYRRIFDNQHEFAVLVKDDPELQKQFVEDLGKMAVIERALGAARQREAMQDVYGAWE CCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELQQLRSRDQELFINDQELNARYLDLTTKASTLVNLLNDAEKCRNAGEVGSALGKYMEAK HHHHHHCCCHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH RLYLYSRFAKEGIESLLEEVLPLN HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA