Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735415
Identifier: 187735415
GI number: 187735415
Start: 1090786
End: 1091124
Strand: Reverse
Name: 187735415
Synonym: Amuc_0914
Alternate gene names: NA
Gene position: 1091124-1090786 (Counterclockwise)
Preceding gene: 187735416
Following gene: 187735413
Centisome position: 40.96
GC content: 54.57
Gene sequence:
>339_bases ATGACAGCCATTCAGCACATCCCCGAACGCACTCCCTTTAATTACGCCGACCTGACTGATTACCGCGAAGGGCAAATCAC CAGTCTGGCCCTTGTACGCTCCAAAGGAGTCAACATGACCATTCTGGCCTTTGACAGCGAGCAACTCCTCCCTACCCACC AGACGCCCGGTCCTGCGCTGATACAGATTCTGGACGGGACGGCCTACTTCACCGTAGGCAATGAAGAAGTTAATCTGCCC CAAGGAAAGAGCCTCCTGATTCCCGCCGGAGTACCTCATTCCGTCATTGCCCGGGAACGATTCAAAATGCTGGTTACTTC CATCCTGCCGCTGGACTAA
Upstream 100 bases:
>100_bases ATGCTGAATGCCAAGGTCCGCTCCCGGGTCTGGAGCGGACCTTTTTCCCGGAAGCCTGTCATGAAGAAACGGGAAGGGCC AACAAGGGTGTCCAATTTAC
Downstream 100 bases:
>100_bases CCGGAAAGCCGTCCCCAGGAAACAACGGAGAACTATTCCGGGGAATTGCCACCCGGACATGGATCTGCGGCAAAACCATT CTTTCACGAGATTCTCCCGA
Product: cupin
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; 5-Nucleotidase SurE; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Conserved Barrel; Cupin 2 Barrel
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTAIQHIPERTPFNYADLTDYREGQITSLALVRSKGVNMTILAFDSEQLLPTHQTPGPALIQILDGTAYFTVGNEEVNLP QGKSLLIPAGVPHSVIARERFKMLVTSILPLD
Sequences:
>Translated_112_residues MTAIQHIPERTPFNYADLTDYREGQITSLALVRSKGVNMTILAFDSEQLLPTHQTPGPALIQILDGTAYFTVGNEEVNLP QGKSLLIPAGVPHSVIARERFKMLVTSILPLD >Mature_111_residues TAIQHIPERTPFNYADLTDYREGQITSLALVRSKGVNMTILAFDSEQLLPTHQTPGPALIQILDGTAYFTVGNEEVNLPQ GKSLLIPAGVPHSVIARERFKMLVTSILPLD
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12314; Mature: 12183
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIQHIPERTPFNYADLTDYREGQITSLALVRSKGVNMTILAFDSEQLLPTHQTPGPAL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEE IQILDGTAYFTVGNEEVNLPQGKSLLIPAGVPHSVIARERFKMLVTSILPLD EEEECCEEEEEECCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAIQHIPERTPFNYADLTDYREGQITSLALVRSKGVNMTILAFDSEQLLPTHQTPGPAL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEE IQILDGTAYFTVGNEEVNLPQGKSLLIPAGVPHSVIARERFKMLVTSILPLD EEEECCEEEEEECCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA