Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735403
Identifier: 187735403
GI number: 187735403
Start: 1075265
End: 1075669
Strand: Reverse
Name: 187735403
Synonym: Amuc_0901
Alternate gene names: NA
Gene position: 1075669-1075265 (Counterclockwise)
Preceding gene: 187735404
Following gene: 187735402
Centisome position: 40.38
GC content: 43.95
Gene sequence:
>405_bases ATGAAAAAGATATTGCAGTTATTGGGCATTTTGACCTTTGTTATTTGCAATTATGGGAATGCAAAGGAATTAAAATGTGA ATACGAATTAAAAAATTTAAACATAGAGCCAGTCAGGGTAGCCAACGCCAAACGCACTTACACAGTCTATATATCCTGTA AGTATACAAGTGTTCATCACACGGGTGAGACAGGGGGGCCAATACCGCTGCGAAAGACAATTACCCCGGTAGTAACCGGT ACAGATGATGAAAAAGAGGGCAAAGCCGAGGCATATGCAGAAGGAGAAAGCACAGTCATCGCAATGGCCCGGCTGCGTTT GACAGAAGAATGCGGTTTGCAATGCGGCAACTGCAACGAAGCAGGCTGCACCTGCGTCGGCTGCAATGACAACATAAATA AATAA
Upstream 100 bases:
>100_bases TATTTTGTTAGATATTTTTGTAACTATCTATCAAGCAATCATTATGTAAAACATATTAAAAATATGTTTACATATATCAA AATTGTCCCATAATTTTAGG
Downstream 100 bases:
>100_bases AACTGATTAATAAATAAACTGATATGAAACCATTACTGAAAATTGCCTTTTTGTCGATAGCCTGCTTTCCCTGTTTTTGC ATTAATAATGCCGCCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKKILQLLGILTFVICNYGNAKELKCEYELKNLNIEPVRVANAKRTYTVYISCKYTSVHHTGETGGPIPLRKTITPVVTG TDDEKEGKAEAYAEGESTVIAMARLRLTEECGLQCGNCNEAGCTCVGCNDNINK
Sequences:
>Translated_134_residues MKKILQLLGILTFVICNYGNAKELKCEYELKNLNIEPVRVANAKRTYTVYISCKYTSVHHTGETGGPIPLRKTITPVVTG TDDEKEGKAEAYAEGESTVIAMARLRLTEECGLQCGNCNEAGCTCVGCNDNINK >Mature_134_residues MKKILQLLGILTFVICNYGNAKELKCEYELKNLNIEPVRVANAKRTYTVYISCKYTSVHHTGETGGPIPLRKTITPVVTG TDDEKEGKAEAYAEGESTVIAMARLRLTEECGLQCGNCNEAGCTCVGCNDNINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14665; Mature: 14665
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILQLLGILTFVICNYGNAKELKCEYELKNLNIEPVRVANAKRTYTVYISCKYTSVHH CHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEEEEE TGETGGPIPLRKTITPVVTGTDDEKEGKAEAYAEGESTVIAMARLRLTEECGLQCGNCNE CCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEEEHHHHHCCHHHCCCCCCCCC AGCTCVGCNDNINK CCCEEECCCCCCCC >Mature Secondary Structure MKKILQLLGILTFVICNYGNAKELKCEYELKNLNIEPVRVANAKRTYTVYISCKYTSVHH CHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEEEEE TGETGGPIPLRKTITPVVTGTDDEKEGKAEAYAEGESTVIAMARLRLTEECGLQCGNCNE CCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEEEHHHHHCCHHHCCCCCCCCC AGCTCVGCNDNINK CCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA