Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735362

Identifier: 187735362

GI number: 187735362

Start: 1026282

End: 1027034

Strand: Reverse

Name: 187735362

Synonym: Amuc_0860

Alternate gene names: NA

Gene position: 1027034-1026282 (Counterclockwise)

Preceding gene: 187735363

Following gene: 187735361

Centisome position: 38.55

GC content: 53.12

Gene sequence:

>753_bases
ATGGGAACGGGTCGGGGCATAGCAGACATCACGCCGCTCACCTTGCTGGATTTTCCAAATAAGGTGGCCTGCATCTTCTG
GCTGAGAGGCTGTAATTTGTTTTGTCAGTACTGTTACAACGTCTCCCTGGTCAGGGGAACGGATTCTCCTGCCGGAGACC
GGACGGACTATCTTGATTTTCTCAGAGATCGGGTGGGATTTCTGGATGGGGTGGTTCTGTCCGGAGGCGAGTGCACGCTG
TGTCCCGACCTTATCCCTATCTGCCGCAATATACGGCAGCTTGGCTTCGCAGTCAAAATAGACACCAACGGCACCCGGCC
CGGCGTGGTGAAAACGCTGGTGGAGGAAGGGCTTTGCGATTATATTGCCCTGGATTACAAAGCGCCGGAAAAACTGTTCG
GCTCCATTACCGGGCGTCCGGACTTATTCCCCTGCTTCACTCAAACGCTGGATTATCTGATCAACAGAAATTTCCCGTTT
GAGGTTCGAACGACAATCCACTCCGGCCTTCTCGGGGAAAAGGAAATCAACCAGATCAGCGGGGATTTGACGTCGCGCGG
CTATAGAGGAACCTACTACCTTCAGAATTTTTTTAATACAGAGGAAACACTCGGCCAAATCGGCGCTCCCGAACGGATGA
TTGACTTATCTCTGCTAAACACGCATATCCCCATAGGGTTGCGCAATTTTCCCATCACGGAGAAAGCTCCCGGCTCCAGC
TCCGGGAAACGGCAGCCGTCCCCTCTGACATAA

Upstream 100 bases:

>100_bases
TCCATGACCGCGTCCACTTCGTGGAACCGGGCCGCCCCTGCTCCTGCTCCGCCCAAACGGAACAGCCGCGATAATTCTCC
CAACAACATATGCGAAGTCG

Downstream 100 bases:

>100_bases
TTTTTTTAAATAAAAGTTTCTATTTGTAAAATCGGGAAGTACCCTTCCGCCCGCCAACCATATTACCAGCTATTATTCAT
GAGTGAAACCCAAAACAAGC

Product: anaerobic ribonucleoside-triphosphate reductase activating protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MGTGRGIADITPLTLLDFPNKVACIFWLRGCNLFCQYCYNVSLVRGTDSPAGDRTDYLDFLRDRVGFLDGVVLSGGECTL
CPDLIPICRNIRQLGFAVKIDTNGTRPGVVKTLVEEGLCDYIALDYKAPEKLFGSITGRPDLFPCFTQTLDYLINRNFPF
EVRTTIHSGLLGEKEINQISGDLTSRGYRGTYYLQNFFNTEETLGQIGAPERMIDLSLLNTHIPIGLRNFPITEKAPGSS
SGKRQPSPLT

Sequences:

>Translated_250_residues
MGTGRGIADITPLTLLDFPNKVACIFWLRGCNLFCQYCYNVSLVRGTDSPAGDRTDYLDFLRDRVGFLDGVVLSGGECTL
CPDLIPICRNIRQLGFAVKIDTNGTRPGVVKTLVEEGLCDYIALDYKAPEKLFGSITGRPDLFPCFTQTLDYLINRNFPF
EVRTTIHSGLLGEKEINQISGDLTSRGYRGTYYLQNFFNTEETLGQIGAPERMIDLSLLNTHIPIGLRNFPITEKAPGSS
SGKRQPSPLT
>Mature_249_residues
GTGRGIADITPLTLLDFPNKVACIFWLRGCNLFCQYCYNVSLVRGTDSPAGDRTDYLDFLRDRVGFLDGVVLSGGECTLC
PDLIPICRNIRQLGFAVKIDTNGTRPGVVKTLVEEGLCDYIALDYKAPEKLFGSITGRPDLFPCFTQTLDYLINRNFPFE
VRTTIHSGLLGEKEINQISGDLTSRGYRGTYYLQNFFNTEETLGQIGAPERMIDLSLLNTHIPIGLRNFPITEKAPGSSS
GKRQPSPLT

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR012840
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 27703; Mature: 27572

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTGRGIADITPLTLLDFPNKVACIFWLRGCNLFCQYCYNVSLVRGTDSPAGDRTDYLDF
CCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHH
LRDRVGFLDGVVLSGGECTLCPDLIPICRNIRQLGFAVKIDTNGTRPGVVKTLVEEGLCD
HHHHHHHHCCEEECCCCEEECHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCHH
YIALDYKAPEKLFGSITGRPDLFPCFTQTLDYLINRNFPFEVRTTIHSGLLGEKEINQIS
EEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCHHHHHHHH
GDLTSRGYRGTYYLQNFFNTEETLGQIGAPERMIDLSLLNTHIPIGLRNFPITEKAPGSS
CHHHCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SGKRQPSPLT
CCCCCCCCCC
>Mature Secondary Structure 
GTGRGIADITPLTLLDFPNKVACIFWLRGCNLFCQYCYNVSLVRGTDSPAGDRTDYLDF
CCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHH
LRDRVGFLDGVVLSGGECTLCPDLIPICRNIRQLGFAVKIDTNGTRPGVVKTLVEEGLCD
HHHHHHHHCCEEECCCCEEECHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCHH
YIALDYKAPEKLFGSITGRPDLFPCFTQTLDYLINRNFPFEVRTTIHSGLLGEKEINQIS
EEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCHHHHHHHH
GDLTSRGYRGTYYLQNFFNTEETLGQIGAPERMIDLSLLNTHIPIGLRNFPITEKAPGSS
CHHHCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SGKRQPSPLT
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]