Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735320
Identifier: 187735320
GI number: 187735320
Start: 962983
End: 964035
Strand: Reverse
Name: 187735320
Synonym: Amuc_0818
Alternate gene names: NA
Gene position: 964035-962983 (Counterclockwise)
Preceding gene: 187735321
Following gene: 187735319
Centisome position: 36.19
GC content: 54.04
Gene sequence:
>1053_bases ATGCCTGCATCTCCGGAGCGCATTCTGGAAAATTTGTTCCCCTTTTACCGGCAGGAAGAATTTCCCGTTCTCCTGCACCA GTATAAAACGTGGTCGGAAAGTCGCCCTCTGGAAGGATGCCGGATTATTGACGCTTCTCCCGTGTTCCGGAATACCTGCG CCAAATACGCCTCTCTTCTGGCCGCAGGAGCGGAGCTGACAGTAGCGGTCTCCCCGGTAATGCCCTATGACCCGGAAACA GCCGTATTATTGGGACAGTATGGAATTCCAGTGGTGGAAGCGGAACGGGCAGGCGGACCTTATGATGTGGTCATGGACTG CGCCGGAGTGCTCAGCCATGTTCCCAGCCGCTACGGGTATGTGGAATTAACCCGCTCGGGTGCGGAACGCTATGCGGCAT GCACGCAGCCCGTGTGGATGGTGGACGCCGGAAAGATTAAACAGATAGAAACCTGCCTTGGAACCGGAGAAAGTTTTTTC CGGGCTCTGGAATCTCTTGGAATAAAAAATGAACAGGGACAGACTCTGGTAGTCATCGGACATGGAAAAGTTGGCCGCGG AATAGCTCTGCATGCTCTCAGACGGAAACTGAATGTCATTGTAGCGGACGTGGAAAAAAAACCTCTGGCTTTCGCCTCTT TTGTGCCGGCAACGGACAGGGAAACCCTTACTGACGCAATCAGGCATGCTTTCTGCGCCGTTACGGCTACGGGAAAGCGG CATGCCATGTCAGGGCTTATTGAGCCGGACATGCCCTTCTCTTCCGGCGTTCTGCTTGCCAATATGGGTGTGGAGGATGA ATGGGGGCCGGAAATTCCGAAAAACCGCCTGTTGAACGAAGGCCGCCCTCTTAATTTTATTCTGCCGGACCCTACGCAAA TGCGTTACATTGATCCGCCCCTGGCTCTTCATAACCAGGGAGCTCTGGAACTTGCCGAAGGCCGAGTTTTGCCTGGCCTT TTTCCTCCGCCGCCGGAAATGGAAGAACATTTTCTTTCCCTGATACGTTCCTGCGGTTCCGTACCGCCTGACATGCTGAA CTGGATTTCCTGA
Upstream 100 bases:
>100_bases AAAAATTATTAAACAAAAGATATTTCTTTAACAAAGTTTTTCTGGGAAAACGACAGGATAGGGATTACCCTCTGCTGTGA GAAACCCTAAGATTTTTGTT
Downstream 100 bases:
>100_bases CTTATCACCTTGTCTTTGCCGGGATAAAGCGGTAGCGTATAGAATACGGTCGGGAACTTATTGTTCCATGGTCGGTTTGA CGTTTCATTGACTTCGCAAC
Product: adenosylhomocysteinase
Products: L-homocysteine; adenosine
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPASPERILENLFPFYRQEEFPVLLHQYKTWSESRPLEGCRIIDASPVFRNTCAKYASLLAAGAELTVAVSPVMPYDPET AVLLGQYGIPVVEAERAGGPYDVVMDCAGVLSHVPSRYGYVELTRSGAERYAACTQPVWMVDAGKIKQIETCLGTGESFF RALESLGIKNEQGQTLVVIGHGKVGRGIALHALRRKLNVIVADVEKKPLAFASFVPATDRETLTDAIRHAFCAVTATGKR HAMSGLIEPDMPFSSGVLLANMGVEDEWGPEIPKNRLLNEGRPLNFILPDPTQMRYIDPPLALHNQGALELAEGRVLPGL FPPPPEMEEHFLSLIRSCGSVPPDMLNWIS
Sequences:
>Translated_350_residues MPASPERILENLFPFYRQEEFPVLLHQYKTWSESRPLEGCRIIDASPVFRNTCAKYASLLAAGAELTVAVSPVMPYDPET AVLLGQYGIPVVEAERAGGPYDVVMDCAGVLSHVPSRYGYVELTRSGAERYAACTQPVWMVDAGKIKQIETCLGTGESFF RALESLGIKNEQGQTLVVIGHGKVGRGIALHALRRKLNVIVADVEKKPLAFASFVPATDRETLTDAIRHAFCAVTATGKR HAMSGLIEPDMPFSSGVLLANMGVEDEWGPEIPKNRLLNEGRPLNFILPDPTQMRYIDPPLALHNQGALELAEGRVLPGL FPPPPEMEEHFLSLIRSCGSVPPDMLNWIS >Mature_349_residues PASPERILENLFPFYRQEEFPVLLHQYKTWSESRPLEGCRIIDASPVFRNTCAKYASLLAAGAELTVAVSPVMPYDPETA VLLGQYGIPVVEAERAGGPYDVVMDCAGVLSHVPSRYGYVELTRSGAERYAACTQPVWMVDAGKIKQIETCLGTGESFFR ALESLGIKNEQGQTLVVIGHGKVGRGIALHALRRKLNVIVADVEKKPLAFASFVPATDRETLTDAIRHAFCAVTATGKRH AMSGLIEPDMPFSSGVLLANMGVEDEWGPEIPKNRLLNEGRPLNFILPDPTQMRYIDPPLALHNQGALELAEGRVLPGLF PPPPEMEEHFLSLIRSCGSVPPDMLNWIS
Specific function: Unknown
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.3.1.1
Molecular weight: Translated: 38376; Mature: 38244
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASPERILENLFPFYRQEEFPVLLHQYKTWSESRPLEGCRIIDASPVFRNTCAKYASLL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH AAGAELTVAVSPVMPYDPETAVLLGQYGIPVVEAERAGGPYDVVMDCAGVLSHVPSRYGY HCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEHHCCCCCHHHHHHHHHHHHHCCCCCCE VELTRSGAERYAACTQPVWMVDAGKIKQIETCLGTGESFFRALESLGIKNEQGQTLVVIG EEEECCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEE HGKVGRGIALHALRRKLNVIVADVEKKPLAFASFVPATDRETLTDAIRHAFCAVTATGKR CCCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHEECCCCH HAMSGLIEPDMPFSSGVLLANMGVEDEWGPEIPKNRLLNEGRPLNFILPDPTQMRYIDPP HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCEEECCC LALHNQGALELAEGRVLPGLFPPPPEMEEHFLSLIRSCGSVPPDMLNWIS CEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure PASPERILENLFPFYRQEEFPVLLHQYKTWSESRPLEGCRIIDASPVFRNTCAKYASLL CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH AAGAELTVAVSPVMPYDPETAVLLGQYGIPVVEAERAGGPYDVVMDCAGVLSHVPSRYGY HCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEHHCCCCCHHHHHHHHHHHHHCCCCCCE VELTRSGAERYAACTQPVWMVDAGKIKQIETCLGTGESFFRALESLGIKNEQGQTLVVIG EEEECCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEE HGKVGRGIALHALRRKLNVIVADVEKKPLAFASFVPATDRETLTDAIRHAFCAVTATGKR CCCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHEECCCCH HAMSGLIEPDMPFSSGVLLANMGVEDEWGPEIPKNRLLNEGRPLNFILPDPTQMRYIDPP HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCEEECCC LALHNQGALELAEGRVLPGLFPPPPEMEEHFLSLIRSCGSVPPDMLNWIS CEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; S-adenosyl-L-homocysteine
Specific reaction: H2O + S-adenosyl-L-homocysteine = L-homocysteine + adenosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA