Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is mnmG [H]
Identifier: 187735314
GI number: 187735314
Start: 955103
End: 956989
Strand: Direct
Name: mnmG [H]
Synonym: Amuc_0812
Alternate gene names: 187735314
Gene position: 955103-956989 (Clockwise)
Preceding gene: 187735313
Following gene: 187735316
Centisome position: 35.85
GC content: 52.2
Gene sequence:
>1887_bases ATGAACTCCTCCTCTTCTTCCGTTTTTCCCCTGTTTGACGTTCTCGTCGTCGGCGCCGGGCACGCAGGCATTGAGGCGGC ACTGGCAGCATCCCGTCTGGGGTGTTCCGTCGCCGTCCTAACTCATAACCTGGATACTATCGGACAAATGTCCTGCAATC CGGCTATTGGGGGACTTGCCAAAGGGCATATCGTCCGGGAAATAGATGCCATGGGGGGAGCGATGGGGTTGAACACGGAT GCTACCGCCATTCAATTCCGGATGCTGAACGCTTCCAAGGGGCCCAGCGTGCGCGCTCCCCGCGCCCAGTGCGATAAAAC AGCCTACCGCACAAGAATGAAAATGGTTCTGGAAACCGCCCCCGGCATACGCCTGTTTCAGGGAGATGTGGTCAAACTGC TCGTCAATGGAGAACAGCAGGCAACGGGAGCCGTTACTTCTCTGGGCTGCGCCATCCATGCCCGCAGCGTGATTATCTGC TCCGGGACATTCATGAAGGGATTGCTTCATGTGGGCCTTCAACACATAACAGGAGGCCGAATGGGTTGCGCTTCTTCCAG CCTTTCCGCCGATCTTGCCATGCTGGGTTTTCAGGTGGAAAGGCTTAAAACAGGAACTTCTCCCCGCGTCAATGGAAGAT CCATCGACTTTTCCGTCTGCGAAATACAGCCCGGAGACGCTCCGGAAGCCCTGTTCAGCTACCGTTCCCGTGATATACTG AAACGTGATTCCGAACCCTTTTGCACTTTGAACACGTGGGGAGATGAAAATTTCCGGATGAAGCAAATGCCGTGCTGGAT CACCTACACCAACCAGACTACGCACGACATTATCCGGAAGAACTTAAAATTCAGCCCCCTTTACAGCGGTATCATTGAAG GCGTAGGCCCCCGGTATTGTCCTTCCATAGAAGATAAAATCGTGCGCTTTGCGGAAAAAAACAGCCATCAGGTATTCCTG GAACCGGAAGGCCGCAGTACGGAGGAATTCTACCTTAACGGAGTTTCTACTTCACTGCCCTACTCCGCTCAGTGCGACTT CATCCATACCATTCCCGGCCTGGAAAACGCACAGCTGATCCGTCCGGGATATGCGGTGGAATACGACTTCTGTCCTCCCA CGCAATTGCATCCTACGCTGGAAACAAAACTGGTGGAAAACCTGTACTTTGCAGGTCAAATCAACGGTACTTCCGGCTAT GAAGAAGCCGCAGCGCAAGGACTAATGGCGGGAGCGAACGCCGCTCTGAAAACCCTGGGCAAACCTTCTCTGGTGCTGCG CCGGGATCAGGCTTACATCGGCGTCATGATAGACGACCTTGTTACCAAAGGAACCGATGAACCTTACCGCATGTTTACCA GCCGGGCAGAATTCCGCCTGTTGCTGCGTCAGGATAATGCAGACCTGCGGTTGGCCCCTCTGGCTTTTGAAGCGGGCCTT ATTACCTGTGAAATGGCCCGGAAGGCTGAAGACAGGAAAAACGCCGTTGAAGAAGGAATAATAAAAGCTGCCGCGCTTAA ACATGAAGGAGTTTCTCTCTCCACATGGCTTAAAAGGCCCGGCAATGACTGGACTCTATTGCCTGAAGAACTGAAAAAAA TGTTCCACGTGGAACATTTGGATGCCATTGCTACGGATATCCAGTACGAAGGGCATATTGAAAGGCAGAAAAAACAGGCG GAAAAAATCATACGGATGGAAAATAAAACTATTCCCTCCGATATTGATTACAAACATGTCCATGCCTTAAAAAAAGAGGC TGTCATCAAGCTGGGCAACATACGTCCTGCAACTATCGGGCAGGCCTCCCGCATTCCTGGAATTACCCCGGCAGATATCG CCCTGTTGCTTGTGCATCTGCAAAAACGCAGCAGGCAACAAACATAA
Upstream 100 bases:
>100_bases AAACTTTGAAAGAATGCATGAAGGCGGATAAAGCCCTGGTGTCCTCCTCTCTTGATCCCCGCCTGATTCTGCATCGTCTT GCTATCTGCTCCGCATCCTG
Downstream 100 bases:
>100_bases TACCCCGCGTTTTTTATTCAAAAATTTCAATTTAAGGAAGACCATAGGAGGCGGGTATTGGAAAAATAAATATGACAGGG ACATCCTTGAGCCGTATATG
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MNSSSSSVFPLFDVLVVGAGHAGIEAALAASRLGCSVAVLTHNLDTIGQMSCNPAIGGLAKGHIVREIDAMGGAMGLNTD ATAIQFRMLNASKGPSVRAPRAQCDKTAYRTRMKMVLETAPGIRLFQGDVVKLLVNGEQQATGAVTSLGCAIHARSVIIC SGTFMKGLLHVGLQHITGGRMGCASSSLSADLAMLGFQVERLKTGTSPRVNGRSIDFSVCEIQPGDAPEALFSYRSRDIL KRDSEPFCTLNTWGDENFRMKQMPCWITYTNQTTHDIIRKNLKFSPLYSGIIEGVGPRYCPSIEDKIVRFAEKNSHQVFL EPEGRSTEEFYLNGVSTSLPYSAQCDFIHTIPGLENAQLIRPGYAVEYDFCPPTQLHPTLETKLVENLYFAGQINGTSGY EEAAAQGLMAGANAALKTLGKPSLVLRRDQAYIGVMIDDLVTKGTDEPYRMFTSRAEFRLLLRQDNADLRLAPLAFEAGL ITCEMARKAEDRKNAVEEGIIKAAALKHEGVSLSTWLKRPGNDWTLLPEELKKMFHVEHLDAIATDIQYEGHIERQKKQA EKIIRMENKTIPSDIDYKHVHALKKEAVIKLGNIRPATIGQASRIPGITPADIALLLVHLQKRSRQQT
Sequences:
>Translated_628_residues MNSSSSSVFPLFDVLVVGAGHAGIEAALAASRLGCSVAVLTHNLDTIGQMSCNPAIGGLAKGHIVREIDAMGGAMGLNTD ATAIQFRMLNASKGPSVRAPRAQCDKTAYRTRMKMVLETAPGIRLFQGDVVKLLVNGEQQATGAVTSLGCAIHARSVIIC SGTFMKGLLHVGLQHITGGRMGCASSSLSADLAMLGFQVERLKTGTSPRVNGRSIDFSVCEIQPGDAPEALFSYRSRDIL KRDSEPFCTLNTWGDENFRMKQMPCWITYTNQTTHDIIRKNLKFSPLYSGIIEGVGPRYCPSIEDKIVRFAEKNSHQVFL EPEGRSTEEFYLNGVSTSLPYSAQCDFIHTIPGLENAQLIRPGYAVEYDFCPPTQLHPTLETKLVENLYFAGQINGTSGY EEAAAQGLMAGANAALKTLGKPSLVLRRDQAYIGVMIDDLVTKGTDEPYRMFTSRAEFRLLLRQDNADLRLAPLAFEAGL ITCEMARKAEDRKNAVEEGIIKAAALKHEGVSLSTWLKRPGNDWTLLPEELKKMFHVEHLDAIATDIQYEGHIERQKKQA EKIIRMENKTIPSDIDYKHVHALKKEAVIKLGNIRPATIGQASRIPGITPADIALLLVHLQKRSRQQT >Mature_628_residues MNSSSSSVFPLFDVLVVGAGHAGIEAALAASRLGCSVAVLTHNLDTIGQMSCNPAIGGLAKGHIVREIDAMGGAMGLNTD ATAIQFRMLNASKGPSVRAPRAQCDKTAYRTRMKMVLETAPGIRLFQGDVVKLLVNGEQQATGAVTSLGCAIHARSVIIC SGTFMKGLLHVGLQHITGGRMGCASSSLSADLAMLGFQVERLKTGTSPRVNGRSIDFSVCEIQPGDAPEALFSYRSRDIL KRDSEPFCTLNTWGDENFRMKQMPCWITYTNQTTHDIIRKNLKFSPLYSGIIEGVGPRYCPSIEDKIVRFAEKNSHQVFL EPEGRSTEEFYLNGVSTSLPYSAQCDFIHTIPGLENAQLIRPGYAVEYDFCPPTQLHPTLETKLVENLYFAGQINGTSGY EEAAAQGLMAGANAALKTLGKPSLVLRRDQAYIGVMIDDLVTKGTDEPYRMFTSRAEFRLLLRQDNADLRLAPLAFEAGL ITCEMARKAEDRKNAVEEGIIKAAALKHEGVSLSTWLKRPGNDWTLLPEELKKMFHVEHLDAIATDIQYEGHIERQKKQA EKIIRMENKTIPSDIDYKHVHALKKEAVIKLGNIRPATIGQASRIPGITPADIALLLVHLQKRSRQQT
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=670, Percent_Identity=40, Blast_Score=441, Evalue=1e-123, Organism=Homo sapiens, GI19882217, Length=695, Percent_Identity=38.5611510791367, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI183227703, Length=710, Percent_Identity=37.7464788732394, Blast_Score=421, Evalue=1e-117, Organism=Escherichia coli, GI2367273, Length=636, Percent_Identity=48.2704402515723, Blast_Score=595, Evalue=1e-171, Organism=Caenorhabditis elegans, GI17534255, Length=632, Percent_Identity=37.8164556962025, Blast_Score=395, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6321202, Length=648, Percent_Identity=40.2777777777778, Blast_Score=442, Evalue=1e-125, Organism=Drosophila melanogaster, GI24658174, Length=653, Percent_Identity=40.1225114854518, Blast_Score=440, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 68855; Mature: 68855
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSSSSVFPLFDVLVVGAGHAGIEAALAASRLGCSVAVLTHNLDTIGQMSCNPAIGGLA CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCCCC KGHIVREIDAMGGAMGLNTDATAIQFRMLNASKGPSVRAPRAQCDKTAYRTRMKMVLETA CCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PGIRLFQGDVVKLLVNGEQQATGAVTSLGCAIHARSVIICSGTFMKGLLHVGLQHITGGR CCCEEECCCEEEEEECCCCHHCCHHHHHHHHEEECEEEEECCHHHHHHHHHHHHHHCCCC MGCASSSLSADLAMLGFQVERLKTGTSPRVNGRSIDFSVCEIQPGDAPEALFSYRSRDIL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH KRDSEPFCTLNTWGDENFRMKQMPCWITYTNQTTHDIIRKNLKFSPLYSGIIEGVGPRYC HCCCCCEEEEECCCCCCCEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCC PSIEDKIVRFAEKNSHQVFLEPEGRSTEEFYLNGVSTSLPYSAQCDFIHTIPGLENAQLI CCHHHHHHHHHCCCCCEEEECCCCCCCHHEEEECCCCCCCCCCCCCEEEECCCCCCCEEE RPGYAVEYDFCPPTQLHPTLETKLVENLYFAGQINGTSGYEEAAAQGLMAGANAALKTLG CCCCEEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCC KPSLVLRRDQAYIGVMIDDLVTKGTDEPYRMFTSRAEFRLLLRQDNADLRLAPLAFEAGL CCCEEEEECCCEEEEEHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCE ITCEMARKAEDRKNAVEEGIIKAAALKHEGVSLSTWLKRPGNDWTLLPEELKKMFHVEHL EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEECHHHHHHHHHHHHH DAIATDIQYEGHIERQKKQAEKIIRMENKTIPSDIDYKHVHALKKEAVIKLGNIRPATIG HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCC QASRIPGITPADIALLLVHLQKRSRQQT CHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSSSSSVFPLFDVLVVGAGHAGIEAALAASRLGCSVAVLTHNLDTIGQMSCNPAIGGLA CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCCCC KGHIVREIDAMGGAMGLNTDATAIQFRMLNASKGPSVRAPRAQCDKTAYRTRMKMVLETA CCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PGIRLFQGDVVKLLVNGEQQATGAVTSLGCAIHARSVIICSGTFMKGLLHVGLQHITGGR CCCEEECCCEEEEEECCCCHHCCHHHHHHHHEEECEEEEECCHHHHHHHHHHHHHHCCCC MGCASSSLSADLAMLGFQVERLKTGTSPRVNGRSIDFSVCEIQPGDAPEALFSYRSRDIL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH KRDSEPFCTLNTWGDENFRMKQMPCWITYTNQTTHDIIRKNLKFSPLYSGIIEGVGPRYC HCCCCCEEEEECCCCCCCEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCC PSIEDKIVRFAEKNSHQVFLEPEGRSTEEFYLNGVSTSLPYSAQCDFIHTIPGLENAQLI CCHHHHHHHHHCCCCCEEEECCCCCCCHHEEEECCCCCCCCCCCCCEEEECCCCCCCEEE RPGYAVEYDFCPPTQLHPTLETKLVENLYFAGQINGTSGYEEAAAQGLMAGANAALKTLG CCCCEEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCC KPSLVLRRDQAYIGVMIDDLVTKGTDEPYRMFTSRAEFRLLLRQDNADLRLAPLAFEAGL CCCEEEEECCCEEEEEHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCE ITCEMARKAEDRKNAVEEGIIKAAALKHEGVSLSTWLKRPGNDWTLLPEELKKMFHVEHL EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEECHHHHHHHHHHHHH DAIATDIQYEGHIERQKKQAEKIIRMENKTIPSDIDYKHVHALKKEAVIKLGNIRPATIG HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCC QASRIPGITPADIALLLVHLQKRSRQQT CHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA