Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735313

Identifier: 187735313

GI number: 187735313

Start: 953940

End: 955103

Strand: Direct

Name: 187735313

Synonym: Amuc_0811

Alternate gene names: NA

Gene position: 953940-955103 (Clockwise)

Preceding gene: 187735309

Following gene: 187735314

Centisome position: 35.81

GC content: 51.37

Gene sequence:

>1164_bases
ATGACAAATACGCCTTTCAACAAGGCGTACTTTATGATATCATGCGGCTACGGTTTTATGGGTTCCAGCACTTTACAACA
ACAGGCCATTCATCTCGTCTTCGGTACGGATGAAGGAATGGTGCGTGAAAAGGCTTCCGGCATCTTTGCCGCTCTGACGG
AAGGCACAAACGAATTTTCCCATGAAATTCTGGAAGCGGCCTGCGGTGATTCCGATGAAGCGGCCCAGCTGGTACGCCAG
GTTATGGAAGCTCTGCGGACCCTCCCGTTTTTTCCGGGGCGCAAAGTAGTCTGGATGAAGAACTGCAATTTTCTGGGAGA
CTCCGTCACGGGGCGTTCCTCCACCACGGAAGCGGCTCTGGATTCTTTCAGGCAATTGCTGGAAAGCGGCCTGGGGTCGG
ACGTCCTGCTTCTTATTTCCGCCTCCGAATTTGACAAACGCCGTTCCTTTAACAAATTCCTGCTTCAATACGCCGCATCG
GAAGAATTGAACAAGCCGGACATCACGAAAGCAGGCTGGGAAGGCAGTTTAATGCCCCTCATTAATAAGGAAACGGCGGC
GCGGGGCATGAATTTCGACTCCGCCGCCCTGGAACTGTTCATTCACCGCGTCAGCGAATCCTCCCGCCAAATCATTTCCG
AAATTGAAAAACTGGATCTTTATCTGGGAGCGGACAGACGCACCGTAATGCCGGAGGATGTCGAGCGCATGGTTCCGCTG
ACGCGTACAGGCGTTATTTTTGAAATTTCCCGGGCTTTGGAAAACAAGAAAAGCGATGCGGCCATCTCTTTGATTGACTT
TCAACTGGAACGCGGTGAAAACGCCATCACAATCATGCGTGCCGCATTCATCCCTACGTTAAGAAATTTGCTGGCTGCCA
GACTTTTATGTGACGCATTCAACCTGAAGCCCACCAATTTCAAGGAATTTACGGCCCGCATTTCTTCCCTGCCCTCCTAT
GCGGCCGCGTTAATTCCCTTGAAAAAAGACGGTACACCCAATGCGTATCCGCTTTTTCTGGCGGCGCAGAATGCTTCCAA
ATTCAAGACGGAACGGCTGAAGCAAACTTTGAAAGAATGCATGAAGGCGGATAAAGCCCTGGTGTCCTCCTCTCTTGATC
CCCGCCTGATTCTGCATCGTCTTGCTATCTGCTCCGCATCCTGA

Upstream 100 bases:

>100_bases
ATGCCTGAAAACGGAGCCTGTCAAGCTTCAGCCGCTTTTTGACATTCCGGTTCCATTGATACTATTTAAGTACTTTCTCT
TCAAATGAAAAAACTTTCAA

Downstream 100 bases:

>100_bases
TGAACTCCTCCTCTTCTTCCGTTTTTCCCCTGTTTGACGTTCTCGTCGTCGGCGCCGGGCACGCAGGCATTGAGGCGGCA
CTGGCAGCATCCCGTCTGGG

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTNTPFNKAYFMISCGYGFMGSSTLQQQAIHLVFGTDEGMVREKASGIFAALTEGTNEFSHEILEAACGDSDEAAQLVRQ
VMEALRTLPFFPGRKVVWMKNCNFLGDSVTGRSSTTEAALDSFRQLLESGLGSDVLLLISASEFDKRRSFNKFLLQYAAS
EELNKPDITKAGWEGSLMPLINKETAARGMNFDSAALELFIHRVSESSRQIISEIEKLDLYLGADRRTVMPEDVERMVPL
TRTGVIFEISRALENKKSDAAISLIDFQLERGENAITIMRAAFIPTLRNLLAARLLCDAFNLKPTNFKEFTARISSLPSY
AAALIPLKKDGTPNAYPLFLAAQNASKFKTERLKQTLKECMKADKALVSSSLDPRLILHRLAICSAS

Sequences:

>Translated_387_residues
MTNTPFNKAYFMISCGYGFMGSSTLQQQAIHLVFGTDEGMVREKASGIFAALTEGTNEFSHEILEAACGDSDEAAQLVRQ
VMEALRTLPFFPGRKVVWMKNCNFLGDSVTGRSSTTEAALDSFRQLLESGLGSDVLLLISASEFDKRRSFNKFLLQYAAS
EELNKPDITKAGWEGSLMPLINKETAARGMNFDSAALELFIHRVSESSRQIISEIEKLDLYLGADRRTVMPEDVERMVPL
TRTGVIFEISRALENKKSDAAISLIDFQLERGENAITIMRAAFIPTLRNLLAARLLCDAFNLKPTNFKEFTARISSLPSY
AAALIPLKKDGTPNAYPLFLAAQNASKFKTERLKQTLKECMKADKALVSSSLDPRLILHRLAICSAS
>Mature_386_residues
TNTPFNKAYFMISCGYGFMGSSTLQQQAIHLVFGTDEGMVREKASGIFAALTEGTNEFSHEILEAACGDSDEAAQLVRQV
MEALRTLPFFPGRKVVWMKNCNFLGDSVTGRSSTTEAALDSFRQLLESGLGSDVLLLISASEFDKRRSFNKFLLQYAASE
ELNKPDITKAGWEGSLMPLINKETAARGMNFDSAALELFIHRVSESSRQIISEIEKLDLYLGADRRTVMPEDVERMVPLT
RTGVIFEISRALENKKSDAAISLIDFQLERGENAITIMRAAFIPTLRNLLAARLLCDAFNLKPTNFKEFTARISSLPSYA
AALIPLKKDGTPNAYPLFLAAQNASKFKTERLKQTLKECMKADKALVSSSLDPRLILHRLAICSAS

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 42854; Mature: 42723

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTPFNKAYFMISCGYGFMGSSTLQQQAIHLVFGTDEGMVREKASGIFAALTEGTNEFS
CCCCCCCCEEEEEECCCCCCCCHHHHHCCEEEEEECCCCHHHHHHCCHHHHHHCCCHHHH
HEILEAACGDSDEAAQLVRQVMEALRTLPFFPGRKVVWMKNCNFLGDSVTGRSSTTEAAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
DSFRQLLESGLGSDVLLLISASEFDKRRSFNKFLLQYAASEELNKPDITKAGWEGSLMPL
HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
INKETAARGMNFDSAALELFIHRVSESSRQIISEIEKLDLYLGADRRTVMPEDVERMVPL
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
TRTGVIFEISRALENKKSDAAISLIDFQLERGENAITIMRAAFIPTLRNLLAARLLCDAF
HHCCHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLKPTNFKEFTARISSLPSYAAALIPLKKDGTPNAYPLFLAAQNASKFKTERLKQTLKEC
CCCCCCHHHHHHHHHHCCHHHHHEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
MKADKALVSSSLDPRLILHRLAICSAS
HHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNTPFNKAYFMISCGYGFMGSSTLQQQAIHLVFGTDEGMVREKASGIFAALTEGTNEFS
CCCCCCCEEEEEECCCCCCCCHHHHHCCEEEEEECCCCHHHHHHCCHHHHHHCCCHHHH
HEILEAACGDSDEAAQLVRQVMEALRTLPFFPGRKVVWMKNCNFLGDSVTGRSSTTEAAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
DSFRQLLESGLGSDVLLLISASEFDKRRSFNKFLLQYAASEELNKPDITKAGWEGSLMPL
HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
INKETAARGMNFDSAALELFIHRVSESSRQIISEIEKLDLYLGADRRTVMPEDVERMVPL
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
TRTGVIFEISRALENKKSDAAISLIDFQLERGENAITIMRAAFIPTLRNLLAARLLCDAF
HHCCHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLKPTNFKEFTARISSLPSYAAALIPLKKDGTPNAYPLFLAAQNASKFKTERLKQTLKEC
CCCCCCHHHHHHHHHHCCHHHHHEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
MKADKALVSSSLDPRLILHRLAICSAS
HHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA