Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735305
Identifier: 187735305
GI number: 187735305
Start: 942092
End: 944230
Strand: Reverse
Name: 187735305
Synonym: Amuc_0803
Alternate gene names: NA
Gene position: 944230-942092 (Counterclockwise)
Preceding gene: 187735306
Following gene: 187735303
Centisome position: 35.44
GC content: 54.98
Gene sequence:
>2139_bases ATGCGTATGCGCTGTCTTTTTTTTCCTCTGTGTTCCGCTATTGCCTTAACGTCTTTTGTCCAAGCCCAGTCCCTGGAGAG GCATCCCCTGTATGAACCCGCCCTTGTTTCCGTAGGAACTCCGGGTGATGCAGGTAATTTATTTGCCGGAGCCAAAGTAA CCGCTTCCGGTCATTACGGCAGTGACCGTCCGGAACTGGCCGTGGACGGGCAGACGAATAACGCCGGCAAATACTGGGGT TGCGAGGGCATTCCCGTCTGGCTCCAGATAGATATGGGAAAGCCCCGGACGCTTTCCTCCCTGCATGTATGGCCCTATTG GGAGGGGGGGCGCATTTACAAATATAAAATAGAAGGTTCCGAAGACGGAAAGAACTGGAAAATGTTGGCGGATCAGTCTT CCAACAGTATTGCCGCCACTCCGGAAGGCGTTCCCTTCAAATTCAATCCGCAGACGGTCCGTTACGTTAAAATCACTTTT TTGGGCAATAGTGCCGGCAATGAGAAGGGGGGGCATCTGGTGGAAATCAAAGGGTACGGACCCGATGCCGCCCTGAGCCT GCAGGCTGCAGCGGTGAAGGATTATGACCGTATTCCTTACAATGGCGCTCCCGGGCAGGAAATGCTTCAGGATGCCGTGC GTCTGTCCGGCTGGAGAGGCGAACGCGCCGGCGGGCAGATTGCCGTCTGGTCTTCCCAGGCGCAGCCCCAGTTATCGGCC TCCTGCGCCGGGGTAAAAAACGCTGCCGGACAGATTATCCCTGTCCGGACTGCCATGATACGCTACACCAGGGGGGGCAA CAGGCTGATTTCAGATATCATCGGCAGCGAAAACAGCTGCGATTTGCAAGCCGGAGGCGTGCGTCCGGTATGGGTGGAGG TCAATATCCCCCCGTCTGCCAAACCCGGCGTGTACAAAGGAAAAGTGGTAGTTTCCGCAGAAAGCGGCTCTCCCGTCAGT GTGCCGGTAATTCTGGAGGTGGCGCCGGAATCCCTCCCTGCTCCCGCGCATTGGCAAGTTCATCTGGACTTGTGGCAGCA TCCGCAGGCCGTGGCCCGCTGGCATGATGTGGAACCGTGGTCTCCGGAGCATTTCGCACTGATGAAGCCGGTGATGAAAA GGCTGGCGGATGCCGGGCAAAAGGCCATTACATGCTCCCTGATTGATGAAGCCTGGAATGCCCAGACTTATGACTGGTTC CCGCCCATGATTGAATGGGTCAAGGGCAAAAACGGAACCATGCGCTGGAATTACGCCAATTTTGACAAGTGGGTTTCCTT CATGATGAACGAGGTGGGCGTCAAGGGGCAGATATCCTGCTATACCATGATTCCCTGGAACATGAAAATCCGTTATTTGG ATGAGGCGACCGGAAAGTACAAATTTCTGGATCTTAAGCCGAACGATCCCTCCTATGAAGCTATCTGGGGGCCTTTCCTG ACGGATTTTCGCAAGCACGTCAAGAGCAAGGGCTGGCTGGGCAAAACCTGCATCGGGCTGGATGAACGGCCGGACGCTAT GGTCAGGGCGGCCAAGAATGTACTGGACAAGTATGCCCCGGAATTCAAAATCGTTTCCGCCGTCAATCGGCCTACGGCCA TGACCCGGGACGTTTATGACGTCTCTCCTGTAATTGACCATGCAGGCACGGTCACGGGCGATCTGCTGGCGCAGCGCAAA AAGGAGGGAAAAAAGACGACGTTCTATGTCTGTGTCCATCCCAAAAAGCCCAACACCTTCACTATTTCTCCGCTGGCGGA GGCGGAATGGCTTCCCCTCTTTGCCGCCGCCAATCATTTGGACGGCTTTTTGAGATGGGCTTATAATTCCTGGAACCGCA ATCCGTTTGAAAAGACGGATTTCGGGAACTGGCCCGCGGGAGACTGCTACCTTGTTTATCCCGGCAATCTCAGTTCCCTG CGGTTTGAAAAACTCCGGGACGGACTGGAGGAATTTGAAAAGGTCAATATCCTGCGCGCCCGCGCCGCAAAAAATCCTAA GGCGAAAGCTGCCGTAGCCCGCATGGATGAAGAGCTTTCCAAGCTCTTTACCGTGGAAAAAAGCCGCGGGGATTCCCATG AGGAAGACGTGTGGAAAGCCCGCGAAATTATCCGTAAAACGACGGAAATTTCCCGCTGA
Upstream 100 bases:
>100_bases CCAAGGCTTACTTTGCTTCCAGAGGAATACCCGTGCGTCCTTTGGCGGAATAGCGGAAACAGCTTTTCTTTTGAGAGAAA ATGAAATTCCGGTGCGTAAT
Downstream 100 bases:
>100_bases CCTTTCTTGCGGGAAAAAGGGAAACCGCTGTATTTCCATGTCTTTCCGGAGGTTCGGTTAAGCTCCGGAAAGGGGGGAGG ATCAGCGGTTTTCTCTTTGG
Product: coagulation factor 5/8 type domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MRMRCLFFPLCSAIALTSFVQAQSLERHPLYEPALVSVGTPGDAGNLFAGAKVTASGHYGSDRPELAVDGQTNNAGKYWG CEGIPVWLQIDMGKPRTLSSLHVWPYWEGGRIYKYKIEGSEDGKNWKMLADQSSNSIAATPEGVPFKFNPQTVRYVKITF LGNSAGNEKGGHLVEIKGYGPDAALSLQAAAVKDYDRIPYNGAPGQEMLQDAVRLSGWRGERAGGQIAVWSSQAQPQLSA SCAGVKNAAGQIIPVRTAMIRYTRGGNRLISDIIGSENSCDLQAGGVRPVWVEVNIPPSAKPGVYKGKVVVSAESGSPVS VPVILEVAPESLPAPAHWQVHLDLWQHPQAVARWHDVEPWSPEHFALMKPVMKRLADAGQKAITCSLIDEAWNAQTYDWF PPMIEWVKGKNGTMRWNYANFDKWVSFMMNEVGVKGQISCYTMIPWNMKIRYLDEATGKYKFLDLKPNDPSYEAIWGPFL TDFRKHVKSKGWLGKTCIGLDERPDAMVRAAKNVLDKYAPEFKIVSAVNRPTAMTRDVYDVSPVIDHAGTVTGDLLAQRK KEGKKTTFYVCVHPKKPNTFTISPLAEAEWLPLFAAANHLDGFLRWAYNSWNRNPFEKTDFGNWPAGDCYLVYPGNLSSL RFEKLRDGLEEFEKVNILRARAAKNPKAKAAVARMDEELSKLFTVEKSRGDSHEEDVWKAREIIRKTTEISR
Sequences:
>Translated_712_residues MRMRCLFFPLCSAIALTSFVQAQSLERHPLYEPALVSVGTPGDAGNLFAGAKVTASGHYGSDRPELAVDGQTNNAGKYWG CEGIPVWLQIDMGKPRTLSSLHVWPYWEGGRIYKYKIEGSEDGKNWKMLADQSSNSIAATPEGVPFKFNPQTVRYVKITF LGNSAGNEKGGHLVEIKGYGPDAALSLQAAAVKDYDRIPYNGAPGQEMLQDAVRLSGWRGERAGGQIAVWSSQAQPQLSA SCAGVKNAAGQIIPVRTAMIRYTRGGNRLISDIIGSENSCDLQAGGVRPVWVEVNIPPSAKPGVYKGKVVVSAESGSPVS VPVILEVAPESLPAPAHWQVHLDLWQHPQAVARWHDVEPWSPEHFALMKPVMKRLADAGQKAITCSLIDEAWNAQTYDWF PPMIEWVKGKNGTMRWNYANFDKWVSFMMNEVGVKGQISCYTMIPWNMKIRYLDEATGKYKFLDLKPNDPSYEAIWGPFL TDFRKHVKSKGWLGKTCIGLDERPDAMVRAAKNVLDKYAPEFKIVSAVNRPTAMTRDVYDVSPVIDHAGTVTGDLLAQRK KEGKKTTFYVCVHPKKPNTFTISPLAEAEWLPLFAAANHLDGFLRWAYNSWNRNPFEKTDFGNWPAGDCYLVYPGNLSSL RFEKLRDGLEEFEKVNILRARAAKNPKAKAAVARMDEELSKLFTVEKSRGDSHEEDVWKAREIIRKTTEISR >Mature_712_residues MRMRCLFFPLCSAIALTSFVQAQSLERHPLYEPALVSVGTPGDAGNLFAGAKVTASGHYGSDRPELAVDGQTNNAGKYWG CEGIPVWLQIDMGKPRTLSSLHVWPYWEGGRIYKYKIEGSEDGKNWKMLADQSSNSIAATPEGVPFKFNPQTVRYVKITF LGNSAGNEKGGHLVEIKGYGPDAALSLQAAAVKDYDRIPYNGAPGQEMLQDAVRLSGWRGERAGGQIAVWSSQAQPQLSA SCAGVKNAAGQIIPVRTAMIRYTRGGNRLISDIIGSENSCDLQAGGVRPVWVEVNIPPSAKPGVYKGKVVVSAESGSPVS VPVILEVAPESLPAPAHWQVHLDLWQHPQAVARWHDVEPWSPEHFALMKPVMKRLADAGQKAITCSLIDEAWNAQTYDWF PPMIEWVKGKNGTMRWNYANFDKWVSFMMNEVGVKGQISCYTMIPWNMKIRYLDEATGKYKFLDLKPNDPSYEAIWGPFL TDFRKHVKSKGWLGKTCIGLDERPDAMVRAAKNVLDKYAPEFKIVSAVNRPTAMTRDVYDVSPVIDHAGTVTGDLLAQRK KEGKKTTFYVCVHPKKPNTFTISPLAEAEWLPLFAAANHLDGFLRWAYNSWNRNPFEKTDFGNWPAGDCYLVYPGNLSSL RFEKLRDGLEEFEKVNILRARAAKNPKAKAAVARMDEELSKLFTVEKSRGDSHEEDVWKAREIIRKTTEISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79316; Mature: 79316
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS50022 FA58C_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMRCLFFPLCSAIALTSFVQAQSLERHPLYEPALVSVGTPGDAGNLFAGAKVTASGHYG CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEECCEEEECCCCC SDRPELAVDGQTNNAGKYWGCEGIPVWLQIDMGKPRTLSSLHVWPYWEGGRIYKYKIEGS CCCCCEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCC EDGKNWKMLADQSSNSIAATPEGVPFKFNPQTVRYVKITFLGNSAGNEKGGHLVEIKGYG CCCCCEEEEECCCCCCEEECCCCCCEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCC PDAALSLQAAAVKDYDRIPYNGAPGQEMLQDAVRLSGWRGERAGGQIAVWSSQAQPQLSA CCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHH SCAGVKNAAGQIIPVRTAMIRYTRGGNRLISDIIGSENSCDLQAGGVRPVWVEVNIPPSA HHCCCHHCCCCEEEEEEEEEEEECCCCHHHHHHHCCCCCCCEECCCCEEEEEEEECCCCC KPGVYKGKVVVSAESGSPVSVPVILEVAPESLPAPAHWQVHLDLWQHPQAVARWHDVEPW CCCEEECEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCC SPEHFALMKPVMKRLADAGQKAITCSLIDEAWNAQTYDWFPPMIEWVKGKNGTMRWNYAN CCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHCCCCCEEEEECCC FDKWVSFMMNEVGVKGQISCYTMIPWNMKIRYLDEATGKYKFLDLKPNDPSYEAIWGPFL HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH TDFRKHVKSKGWLGKTCIGLDERPDAMVRAAKNVLDKYAPEFKIVSAVNRPTAMTRDVYD HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCC VSPVIDHAGTVTGDLLAQRKKEGKKTTFYVCVHPKKPNTFTISPLAEAEWLPLFAAANHL CCHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHH DGFLRWAYNSWNRNPFEKTDFGNWPAGDCYLVYPGNLSSLRFEKLRDGLEEFEKVNILRA HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH RAAKNPKAKAAVARMDEELSKLFTVEKSRGDSHEEDVWKAREIIRKTTEISR HHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRMRCLFFPLCSAIALTSFVQAQSLERHPLYEPALVSVGTPGDAGNLFAGAKVTASGHYG CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEECCEEEECCCCC SDRPELAVDGQTNNAGKYWGCEGIPVWLQIDMGKPRTLSSLHVWPYWEGGRIYKYKIEGS CCCCCEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCC EDGKNWKMLADQSSNSIAATPEGVPFKFNPQTVRYVKITFLGNSAGNEKGGHLVEIKGYG CCCCCEEEEECCCCCCEEECCCCCCEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCC PDAALSLQAAAVKDYDRIPYNGAPGQEMLQDAVRLSGWRGERAGGQIAVWSSQAQPQLSA CCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHH SCAGVKNAAGQIIPVRTAMIRYTRGGNRLISDIIGSENSCDLQAGGVRPVWVEVNIPPSA HHCCCHHCCCCEEEEEEEEEEEECCCCHHHHHHHCCCCCCCEECCCCEEEEEEEECCCCC KPGVYKGKVVVSAESGSPVSVPVILEVAPESLPAPAHWQVHLDLWQHPQAVARWHDVEPW CCCEEECEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCC SPEHFALMKPVMKRLADAGQKAITCSLIDEAWNAQTYDWFPPMIEWVKGKNGTMRWNYAN CCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHCCCCCEEEEECCC FDKWVSFMMNEVGVKGQISCYTMIPWNMKIRYLDEATGKYKFLDLKPNDPSYEAIWGPFL HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH TDFRKHVKSKGWLGKTCIGLDERPDAMVRAAKNVLDKYAPEFKIVSAVNRPTAMTRDVYD HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCC VSPVIDHAGTVTGDLLAQRKKEGKKTTFYVCVHPKKPNTFTISPLAEAEWLPLFAAANHL CCHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHH DGFLRWAYNSWNRNPFEKTDFGNWPAGDCYLVYPGNLSSLRFEKLRDGLEEFEKVNILRA HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH RAAKNPKAKAAVARMDEELSKLFTVEKSRGDSHEEDVWKAREIIRKTTEISR HHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA