Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735292
Identifier: 187735292
GI number: 187735292
Start: 926132
End: 926785
Strand: Reverse
Name: 187735292
Synonym: Amuc_0789
Alternate gene names: NA
Gene position: 926785-926132 (Counterclockwise)
Preceding gene: 187735293
Following gene: 187735287
Centisome position: 34.79
GC content: 51.68
Gene sequence:
>654_bases ATGATGTCCGCCCAGGCGGCTACGATTGTTGCTGAGCTTCCTGAATCGCAAAGCGTATCACAGACCGCCACTATGGCGAG AACATCGGGGCAACAGCTTCTGGACAAAGTAAAAGGCCTGCAAAATGGAATATATGCCGGCGGCAATAACAACAGTGTTG GGAATTGGACGGTAAACGGCGAAGGCACCTGGGTTAACCAGGATGATGTAGGCTCCATTACATTATGCGGTCGCTCCGGA GTAGCGGGGTCTTCCTTTGCCATGGTTCTTGGAGGGCCGCAGGAGGGGGATTCCGTTTCTTCCATTACGTTTTCCTGCAA TACTCCTTCTTCTGTAATCAGCAGTTATTCCATGGTACTTGCCGTATATGATTCAACCGGCACTCTGGTTGAGGAACTTT CCAAGATACAGGATTTTTCATTTACCTCTACATCGGAAACAACGACAATTTCCCTGGATATGTCGGCGGCTCCCCTTACC TGGGAGGAAGGGTATAAGGTAGTTGCCGGAGTACGCGGTGGTGCTGGAGGCGCTACTTCCGCTTATACAATTACAGGTAT ACAGGTTTCCTATGAAACGGTTCCCGAGCCTGCCGCAGCGTCTTTGGGCCTGTTGGGCCTGGGAGCTATGCTGTTGCGCC GCAGACGTTCATAG
Upstream 100 bases:
>100_bases ATGATGTTACGGAAAGAAAAAGAGCGGATTAACAATCCTCTAATCAATGCAAAGCGTTATGAGAGTTTATCATTATGTTT TGTTAGCCAGTTGCGTATGT
Downstream 100 bases:
>100_bases TAAATATCCTCGTTATTCGGGAGGCAGCTGAAAAGCTGCCTCTTTTTTATTTTCGGAACGGGAATATGTCTTTGTTTTTG GGGTAGTTGCGAAAGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MMSAQAATIVAELPESQSVSQTATMARTSGQQLLDKVKGLQNGIYAGGNNNSVGNWTVNGEGTWVNQDDVGSITLCGRSG VAGSSFAMVLGGPQEGDSVSSITFSCNTPSSVISSYSMVLAVYDSTGTLVEELSKIQDFSFTSTSETTTISLDMSAAPLT WEEGYKVVAGVRGGAGGATSAYTITGIQVSYETVPEPAAASLGLLGLGAMLLRRRRS
Sequences:
>Translated_217_residues MMSAQAATIVAELPESQSVSQTATMARTSGQQLLDKVKGLQNGIYAGGNNNSVGNWTVNGEGTWVNQDDVGSITLCGRSG VAGSSFAMVLGGPQEGDSVSSITFSCNTPSSVISSYSMVLAVYDSTGTLVEELSKIQDFSFTSTSETTTISLDMSAAPLT WEEGYKVVAGVRGGAGGATSAYTITGIQVSYETVPEPAAASLGLLGLGAMLLRRRRS >Mature_217_residues MMSAQAATIVAELPESQSVSQTATMARTSGQQLLDKVKGLQNGIYAGGNNNSVGNWTVNGEGTWVNQDDVGSITLCGRSG VAGSSFAMVLGGPQEGDSVSSITFSCNTPSSVISSYSMVLAVYDSTGTLVEELSKIQDFSFTSTSETTTISLDMSAAPLT WEEGYKVVAGVRGGAGGATSAYTITGIQVSYETVPEPAAASLGLLGLGAMLLRRRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22344; Mature: 22344
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAQAATIVAELPESQSVSQTATMARTSGQQLLDKVKGLQNGIYAGGNNNSVGNWTVNG CCCCHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCEEEECC EGTWVNQDDVGSITLCGRSGVAGSSFAMVLGGPQEGDSVSSITFSCNTPSSVISSYSMVL CCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHCEEEEE AVYDSTGTLVEELSKIQDFSFTSTSETTTISLDMSAAPLTWEEGYKVVAGVRGGAGGATS EEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHCCCEEEEEECCCCCCCCC AYTITGIQVSYETVPEPAAASLGLLGLGAMLLRRRRS EEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMSAQAATIVAELPESQSVSQTATMARTSGQQLLDKVKGLQNGIYAGGNNNSVGNWTVNG CCCCHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCEEEECC EGTWVNQDDVGSITLCGRSGVAGSSFAMVLGGPQEGDSVSSITFSCNTPSSVISSYSMVL CCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHCEEEEE AVYDSTGTLVEELSKIQDFSFTSTSETTTISLDMSAAPLTWEEGYKVVAGVRGGAGGATS EEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHCCCEEEEEECCCCCCCCC AYTITGIQVSYETVPEPAAASLGLLGLGAMLLRRRRS EEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA