| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735239
Identifier: 187735239
GI number: 187735239
Start: 864887
End: 865402
Strand: Reverse
Name: 187735239
Synonym: Amuc_0734
Alternate gene names: NA
Gene position: 865402-864887 (Counterclockwise)
Preceding gene: 187735240
Following gene: 187735238
Centisome position: 32.48
GC content: 24.03
Gene sequence:
>516_bases ATGGATACTAATTTATTGTCCTATCAATCCTTTCTTGATATAATGAAGGTTATATATCCTGTGTTTCCGCTTCCAAATAA TAAACAATTCAAAATATGCATTGATTTTATAAAGTCTGAATCTTTTGCGCTGCCTGTAATTGAATTTTGTGAATATGTCC ATGTTTATAAAATAAATTGGTTAAAATGTTCATGGGAGTATGATTTAATGCCACTTGAATATGATACAACAATTTTGCCG CATTATATATTTTCAACATCTTTTCTTAGGTATTATTTTCCGACATGTTTAAATTTAACTATTAAATATTTTTTTGGTGA TTATCATAAATATGAAATTGGAAATATCGATTCATTTGTAGGATATACAATTGGTGCTGTTATTGAAAATTATAAGAATT TAAATGAAAGTGAAAAGAATTTGTTGGGAAGAATATTAAAACTAATGGAAAATAATTCGTTTTATGATTATAAAGATGAA TGTATAAAATTGAAAAATAAAATTATGAATAATTAG
Upstream 100 bases:
>100_bases TTGAGCGCGCTTTAGCGGGCAAAAAACGTTGCCAAGATAAACTCAATCAATTATTATGAAATTCTCATAGTCAAAAAATA AATTAAATTTTTTATCTATT
Downstream 100 bases:
>100_bases ATATAATAATTTATATTATCGTTCTATCCCCAAGATTGAGGATATAGAATTTTCTTTATTATATTCATCATATATCGAAT GATCATGTGGAATATATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINWLKCSWEYDLMPLEYDTTILP HYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFVGYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDE CIKLKNKIMNN
Sequences:
>Translated_171_residues MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINWLKCSWEYDLMPLEYDTTILP HYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFVGYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDE CIKLKNKIMNN >Mature_171_residues MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINWLKCSWEYDLMPLEYDTTILP HYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFVGYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDE CIKLKNKIMNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20497; Mature: 20497
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINW CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEEEHHCCCCCCCHHHHHHHHHHEEEEE LKCSWEYDLMPLEYDTTILPHYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFV EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHH GYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDECIKLKNKIMNN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINW CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEEEHHCCCCCCCHHHHHHHHHHEEEEE LKCSWEYDLMPLEYDTTILPHYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFV EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHH GYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDECIKLKNKIMNN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA