Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735239

Identifier: 187735239

GI number: 187735239

Start: 864887

End: 865402

Strand: Reverse

Name: 187735239

Synonym: Amuc_0734

Alternate gene names: NA

Gene position: 865402-864887 (Counterclockwise)

Preceding gene: 187735240

Following gene: 187735238

Centisome position: 32.48

GC content: 24.03

Gene sequence:

>516_bases
ATGGATACTAATTTATTGTCCTATCAATCCTTTCTTGATATAATGAAGGTTATATATCCTGTGTTTCCGCTTCCAAATAA
TAAACAATTCAAAATATGCATTGATTTTATAAAGTCTGAATCTTTTGCGCTGCCTGTAATTGAATTTTGTGAATATGTCC
ATGTTTATAAAATAAATTGGTTAAAATGTTCATGGGAGTATGATTTAATGCCACTTGAATATGATACAACAATTTTGCCG
CATTATATATTTTCAACATCTTTTCTTAGGTATTATTTTCCGACATGTTTAAATTTAACTATTAAATATTTTTTTGGTGA
TTATCATAAATATGAAATTGGAAATATCGATTCATTTGTAGGATATACAATTGGTGCTGTTATTGAAAATTATAAGAATT
TAAATGAAAGTGAAAAGAATTTGTTGGGAAGAATATTAAAACTAATGGAAAATAATTCGTTTTATGATTATAAAGATGAA
TGTATAAAATTGAAAAATAAAATTATGAATAATTAG

Upstream 100 bases:

>100_bases
TTGAGCGCGCTTTAGCGGGCAAAAAACGTTGCCAAGATAAACTCAATCAATTATTATGAAATTCTCATAGTCAAAAAATA
AATTAAATTTTTTATCTATT

Downstream 100 bases:

>100_bases
ATATAATAATTTATATTATCGTTCTATCCCCAAGATTGAGGATATAGAATTTTCTTTATTATATTCATCATATATCGAAT
GATCATGTGGAATATATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINWLKCSWEYDLMPLEYDTTILP
HYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFVGYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDE
CIKLKNKIMNN

Sequences:

>Translated_171_residues
MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINWLKCSWEYDLMPLEYDTTILP
HYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFVGYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDE
CIKLKNKIMNN
>Mature_171_residues
MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINWLKCSWEYDLMPLEYDTTILP
HYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFVGYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDE
CIKLKNKIMNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20497; Mature: 20497

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINW
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEEEHHCCCCCCCHHHHHHHHHHEEEEE
LKCSWEYDLMPLEYDTTILPHYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFV
EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHH
GYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDECIKLKNKIMNN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTNLLSYQSFLDIMKVIYPVFPLPNNKQFKICIDFIKSESFALPVIEFCEYVHVYKINW
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEEEHHCCCCCCCHHHHHHHHHHEEEEE
LKCSWEYDLMPLEYDTTILPHYIFSTSFLRYYFPTCLNLTIKYFFGDYHKYEIGNIDSFV
EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHH
GYTIGAVIENYKNLNESEKNLLGRILKLMENNSFYDYKDECIKLKNKIMNN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA