| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735238
Identifier: 187735238
GI number: 187735238
Start: 863213
End: 863869
Strand: Reverse
Name: 187735238
Synonym: Amuc_0732
Alternate gene names: NA
Gene position: 863869-863213 (Counterclockwise)
Preceding gene: 187735239
Following gene: 187735237
Centisome position: 32.43
GC content: 26.94
Gene sequence:
>657_bases ATGATTAAATCAATCAAAATTATGAGAAAAATATTTCTGTTTTTTATTTTATTATTCCCGATGAGTGTCTATTCTGATGT GAATAATTATCAGGATTCAGACTATGTTAAAAACGATTTTTCAATAAAAGAACAAGAATATTTAAAAAAGTATATACTTC AATCTTCTGCATTCTTAATGCGTGCTGTAGGTAATTCCAAGTATTCTTCTTCTATATTAAGTGATCAAAATAACCACTTT ATATTGGAGCAGTCTATGAATTTTTATCGGAAATTCGATGTTAAATATTTACCGAAGATAGTTCAAAAATATCTTTTTCA GTGTTTTCTTATAAATCAAATGATAATTAGCAAGAGTGAACGTAATTATTTCAAAACCGTGATTTTGTTAAATAAAAAGA AAGTAATTGAAAATCAATTTTATAATGAAATGAAGAAACATGGATATGATTGGAATAGTAGAAGCATATTGGCTCATTTC ATAGGAAAAAATCCGGAAGACGTTCTGAAAAGATTAGTTACAGACAGTTTTGAAAAAATTGCCGGGAACAGAACGATAGC TATTGATCCCAAAGATAAAAGAACGATGGAAATAATCATAAAAAATGCATACGTTGAATTTGCCAATTATTTAGATGATG AATCTCAGAAAAAGTAA
Upstream 100 bases:
>100_bases TCTGTAGAAGAGAATAAAATTCAAGGCATTCTATTTATTATTGCATCAGCTTTTATTTTTGTTGACAATAGAAATTGTAA ATTAAAATGCAAACAGATAT
Downstream 100 bases:
>100_bases TTAATTTCTTGAAACAAAAGTTATCTGATAAAGAAGAGAATTAAATTGAATAGGTTTTTTATTGGTTGCATCTTTTTGTG GAGATCGATGTTTTAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIKSIKIMRKIFLFFILLFPMSVYSDVNNYQDSDYVKNDFSIKEQEYLKKYILQSSAFLMRAVGNSKYSSSILSDQNNHF ILEQSMNFYRKFDVKYLPKIVQKYLFQCFLINQMIISKSERNYFKTVILLNKKKVIENQFYNEMKKHGYDWNSRSILAHF IGKNPEDVLKRLVTDSFEKIAGNRTIAIDPKDKRTMEIIIKNAYVEFANYLDDESQKK
Sequences:
>Translated_218_residues MIKSIKIMRKIFLFFILLFPMSVYSDVNNYQDSDYVKNDFSIKEQEYLKKYILQSSAFLMRAVGNSKYSSSILSDQNNHF ILEQSMNFYRKFDVKYLPKIVQKYLFQCFLINQMIISKSERNYFKTVILLNKKKVIENQFYNEMKKHGYDWNSRSILAHF IGKNPEDVLKRLVTDSFEKIAGNRTIAIDPKDKRTMEIIIKNAYVEFANYLDDESQKK >Mature_218_residues MIKSIKIMRKIFLFFILLFPMSVYSDVNNYQDSDYVKNDFSIKEQEYLKKYILQSSAFLMRAVGNSKYSSSILSDQNNHF ILEQSMNFYRKFDVKYLPKIVQKYLFQCFLINQMIISKSERNYFKTVILLNKKKVIENQFYNEMKKHGYDWNSRSILAHF IGKNPEDVLKRLVTDSFEKIAGNRTIAIDPKDKRTMEIIIKNAYVEFANYLDDESQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26046; Mature: 26046
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSIKIMRKIFLFFILLFPMSVYSDVNNYQDSDYVKNDFSIKEQEYLKKYILQSSAFLM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHH RAVGNSKYSSSILSDQNNHFILEQSMNFYRKFDVKYLPKIVQKYLFQCFLINQMIISKSE HHHCCCHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RNYFKTVILLNKKKVIENQFYNEMKKHGYDWNSRSILAHFIGKNPEDVLKRLVTDSFEKI HHHHHHHHEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGNRTIAIDPKDKRTMEIIIKNAYVEFANYLDDESQKK HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKSIKIMRKIFLFFILLFPMSVYSDVNNYQDSDYVKNDFSIKEQEYLKKYILQSSAFLM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHH RAVGNSKYSSSILSDQNNHFILEQSMNFYRKFDVKYLPKIVQKYLFQCFLINQMIISKSE HHHCCCHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RNYFKTVILLNKKKVIENQFYNEMKKHGYDWNSRSILAHFIGKNPEDVLKRLVTDSFEKI HHHHHHHHEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGNRTIAIDPKDKRTMEIIIKNAYVEFANYLDDESQKK HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA