Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735205
Identifier: 187735205
GI number: 187735205
Start: 824365
End: 824868
Strand: Direct
Name: 187735205
Synonym: Amuc_0699
Alternate gene names: NA
Gene position: 824365-824868 (Clockwise)
Preceding gene: 187735204
Following gene: 187735207
Centisome position: 30.94
GC content: 55.36
Gene sequence:
>504_bases ATGACCTGTAAATTTATCTCCTTCCTTTTTATGCAGGATACGGTTTATTGCTTCCATCTCCTTGCCGGAAGGCAGAAGCG GAGCCTTCTGTATGCCTTGTGCTCCGCTCTCCTTGTTGCAGCAGTCTGGCTGCTTCATCCGGAATGGCCTTTCTGGGCGG GCTACATTGCCTGGGCACTCGCTTACGCGGCAACGCTGATTGTTCAACACACCATTCCCCTTCCCATCCGCTGCCCGCAC TGCGGAAACGCCGGGCTTTATTCTGCTCCGCAAACTCCGGAAGAACAAAGAAGGCCGGATACAGGCATCATGCTGGAATG CCGGGGTTGCGGTTCCACCTTTTACACGGACGCCTATTTGCCCTGGCCGGGAAAAATTATCCGCCGGCGCCCCACTTGCC CGGAAGAATGGGAAGAAAAATCTGCCCGTAAACAAGCCGGGCCCGCTTCCTCCGGAGAGGAACGCAGGCCGGAAAGGTCT TTCGTCAACGGAGGAAAAATCTAA
Upstream 100 bases:
>100_bases TGGCGGCCCAAAAACGCCATTGACGGCCGTTACCTGTGGCTGCCCATGAAATGGGAGGGTGACCAGATTATCCTGGAATG GAAGGATGAATGGACGCTGG
Downstream 100 bases:
>100_bases CGGGCTTTTTTGGAAGCCATCACGTAATTCCTCATGCGCTGGTCTGCGGGGGTGGTGGGGCGCACGCTGGTAACCCAATT GCCGTCCTTATCCTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTCKFISFLFMQDTVYCFHLLAGRQKRSLLYALCSALLVAAVWLLHPEWPFWAGYIAWALAYAATLIVQHTIPLPIRCPH CGNAGLYSAPQTPEEQRRPDTGIMLECRGCGSTFYTDAYLPWPGKIIRRRPTCPEEWEEKSARKQAGPASSGEERRPERS FVNGGKI
Sequences:
>Translated_167_residues MTCKFISFLFMQDTVYCFHLLAGRQKRSLLYALCSALLVAAVWLLHPEWPFWAGYIAWALAYAATLIVQHTIPLPIRCPH CGNAGLYSAPQTPEEQRRPDTGIMLECRGCGSTFYTDAYLPWPGKIIRRRPTCPEEWEEKSARKQAGPASSGEERRPERS FVNGGKI >Mature_166_residues TCKFISFLFMQDTVYCFHLLAGRQKRSLLYALCSALLVAAVWLLHPEWPFWAGYIAWALAYAATLIVQHTIPLPIRCPHC GNAGLYSAPQTPEEQRRPDTGIMLECRGCGSTFYTDAYLPWPGKIIRRRPTCPEEWEEKSARKQAGPASSGEERRPERSF VNGGKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18908; Mature: 18777
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCKFISFLFMQDTVYCFHLLAGRQKRSLLYALCSALLVAAVWLLHPEWPFWAGYIAWAL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AYAATLIVQHTIPLPIRCPHCGNAGLYSAPQTPEEQRRPDTGIMLECRGCGSTFYTDAYL HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCEECCCCC PWPGKIIRRRPTCPEEWEEKSARKQAGPASSGEERRPERSFVNGGKI CCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure TCKFISFLFMQDTVYCFHLLAGRQKRSLLYALCSALLVAAVWLLHPEWPFWAGYIAWAL CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AYAATLIVQHTIPLPIRCPHCGNAGLYSAPQTPEEQRRPDTGIMLECRGCGSTFYTDAYL HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCEECCCCC PWPGKIIRRRPTCPEEWEEKSARKQAGPASSGEERRPERSFVNGGKI CCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA