| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735198
Identifier: 187735198
GI number: 187735198
Start: 816854
End: 817192
Strand: Reverse
Name: 187735198
Synonym: Amuc_0692
Alternate gene names: NA
Gene position: 817192-816854 (Counterclockwise)
Preceding gene: 187735206
Following gene: 187735197
Centisome position: 30.67
GC content: 59.0
Gene sequence:
>339_bases ATGGCGACAGCACAGCTTCCGCAGGCCACCATCGGGCTGAATACCGCACCCGCGGCCTCTCCGGTTTCTTCCGCCTCCTT TACGGCCAGGAAGTTTCAAGAAGATACGGATGCGGCTCCCAGTACGCTGCTGAATGTCCTCTCCTTTGTGGCCCTTGCCT TTGCGCTTGTTTTCATCGGTTATCAATACGCTACGGACACCTTGGAAGCCCGCAGCATGGTTGGCTGGCTGGGCGGAGAC TCCAAGCCTGCCCCCGCTGCTCCCGCCGCCGATGAAGAAACGGCCGATGACGTTTCTGCTGAAGAGTCTTCCGATGATGG CGCCGATGCGGAAGAATAA
Upstream 100 bases:
>100_bases CGGCTCCGCCACTACGCCTGTGGCCCCCGTGGTTCCTCCTGCTGGCGCGGCGCCTGCCGCTGCCGCTCCTACTGTTCCTC TGACTCCTCCCGGAGCAGGC
Downstream 100 bases:
>100_bases GTGAACGTAATGATTGTTGAAATACTCTAAGCGGTACTATGGCAAACGTATTTTCTGAAGCAAATTTTGAGGATGAAGTT CTGAAGTCCGACATTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MATAQLPQATIGLNTAPAASPVSSASFTARKFQEDTDAAPSTLLNVLSFVALAFALVFIGYQYATDTLEARSMVGWLGGD SKPAPAAPAADEETADDVSAEESSDDGADAEE
Sequences:
>Translated_112_residues MATAQLPQATIGLNTAPAASPVSSASFTARKFQEDTDAAPSTLLNVLSFVALAFALVFIGYQYATDTLEARSMVGWLGGD SKPAPAAPAADEETADDVSAEESSDDGADAEE >Mature_111_residues ATAQLPQATIGLNTAPAASPVSSASFTARKFQEDTDAAPSTLLNVLSFVALAFALVFIGYQYATDTLEARSMVGWLGGDS KPAPAAPAADEETADDVSAEESSDDGADAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11457; Mature: 11326
Theoretical pI: Translated: 3.51; Mature: 3.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAQLPQATIGLNTAPAASPVSSASFTARKFQEDTDAAPSTLLNVLSFVALAFALVFIG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YQYATDTLEARSMVGWLGGDSKPAPAAPAADEETADDVSAEESSDDGADAEE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATAQLPQATIGLNTAPAASPVSSASFTARKFQEDTDAAPSTLLNVLSFVALAFALVFIG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YQYATDTLEARSMVGWLGGDSKPAPAAPAADEETADDVSAEESSDDGADAEE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA