| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735196
Identifier: 187735196
GI number: 187735196
Start: 814991
End: 816271
Strand: Reverse
Name: 187735196
Synonym: Amuc_0690
Alternate gene names: NA
Gene position: 816271-814991 (Counterclockwise)
Preceding gene: 187735197
Following gene: 187735195
Centisome position: 30.64
GC content: 55.5
Gene sequence:
>1281_bases ATGCGATTTATCTCTGCCATTCTGCCTTTCCTTTCAGTCTGCTGCCTTCTTCCCTCCGCCTGGGGCGCGGGCAACATGGC GCCGGATTTAAAGTCTGGTGCGTTCTGGAAGCTGCCTCAGCCGGATTTGTTCGGAAAGTATTTTAACGGAGAGCCCGGCG GCTGGGTGGATAAAGGCAAGACCCAGCTCCGGATTGCGAAGCCCTCCATCAAGATAGGGGACATGTCCCTGGGGGAAATG CTGGTGAACTGGAAGGACGGAGCCCCCCAGTCAATGACTGTCATGATGTACAACAAGGGGGATAACGGGGCCATTGGCAA GGATGAATTTGACAAGCGCCTGGAGCTCATCAAGGAATCCCTGACCGCTCTTACCGGGATTCAGCCCAAGGAGTACCGGG CCTCCCGTAAGGAGGCGGTAGTCAAAGTCAACGGCTGGTCCTGGATTTGGGACAACGGGGCGATTACCCTGGAGATCAAT ACATCGCGGGAGGGCAGGGAGTTTGAAGCGGAATTTATCCGGATGAAGGCCGGTCCCACGGAAGATTCCATCGCGAGGGG AGATGCTTCTTCCCGGGCCAGAAAGGCGGATATCAAGCAGCACGTCAGGAAAGAAGGAAAGCGGGTGGTGATTCAGGATA TTCCCATGGTGGACCAGGGCCAGAAAGGTTATTGCGTGGTGGCTACCGCCGCCCGCATTTTTGCCTATTATGGAATGGAC TATGTGGATCAGCATGAACTGGCTTCCCTGGCCAATACCTCTGCGGACGGAGGCACTAATACGGCGGCAATGGCGGAAAA CCTGAAAAAAATCGGGACGCGCTTCCAGATACGGATCAAAGTGCTGGATTCCCTGGCGAATTCCCGTGATTTCAGGAATC TGCTGAAAGCCTATAACCGCGCTGCCTCCAAGCTGAAAAAAGAGAAGGTGGAAAATGAACATGACTGGTCCGGTTTCTGG GACAATGCGGACGGAGAAGTCCTGAAGCTGGCGCGTGCCGGATCACCGTCCCAGGTGGACAGGTGGCTCAATGCCATCAG GCCCTATATCATGGCGGGCATCCCCGTGTTTTGGTCCGTGCAGCTTGGCATTGTTCCGGAACCGTTGCGTTTGTCCCAGA CGCGCGGAGGCCATTTGAGGCTGATTATCGGTTTTGACGAGGAAAAGAAAACGCTTATCTTTTCAGATTCCTGGGGGGCC GCCCATACGGAGAAGGAAATGCCGCTGGCGGATGCCATCGCCATTACGACGGGGCGGCAGGTCATGCAGCCTTCCAAATA A
Upstream 100 bases:
>100_bases TGGAGGAAGATTCATTTTTTCTTGGCAGAACCGTCATGGGAGAATACATTACCAGCGTAGATTCCGAGCAGCGGGGCTAT TCCCCGCCCCTTTTTTCGTT
Downstream 100 bases:
>100_bases CAGGTGCGGCATATCCCCTCCTTCTCTGCCGGAAAATCCGTAATATTCTCTCCGTGGTGAAGCAATTCTGCTGGCATGGG CAAGGCGCTGTATTATACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MRFISAILPFLSVCCLLPSAWGAGNMAPDLKSGAFWKLPQPDLFGKYFNGEPGGWVDKGKTQLRIAKPSIKIGDMSLGEM LVNWKDGAPQSMTVMMYNKGDNGAIGKDEFDKRLELIKESLTALTGIQPKEYRASRKEAVVKVNGWSWIWDNGAITLEIN TSREGREFEAEFIRMKAGPTEDSIARGDASSRARKADIKQHVRKEGKRVVIQDIPMVDQGQKGYCVVATAARIFAYYGMD YVDQHELASLANTSADGGTNTAAMAENLKKIGTRFQIRIKVLDSLANSRDFRNLLKAYNRAASKLKKEKVENEHDWSGFW DNADGEVLKLARAGSPSQVDRWLNAIRPYIMAGIPVFWSVQLGIVPEPLRLSQTRGGHLRLIIGFDEEKKTLIFSDSWGA AHTEKEMPLADAIAITTGRQVMQPSK
Sequences:
>Translated_426_residues MRFISAILPFLSVCCLLPSAWGAGNMAPDLKSGAFWKLPQPDLFGKYFNGEPGGWVDKGKTQLRIAKPSIKIGDMSLGEM LVNWKDGAPQSMTVMMYNKGDNGAIGKDEFDKRLELIKESLTALTGIQPKEYRASRKEAVVKVNGWSWIWDNGAITLEIN TSREGREFEAEFIRMKAGPTEDSIARGDASSRARKADIKQHVRKEGKRVVIQDIPMVDQGQKGYCVVATAARIFAYYGMD YVDQHELASLANTSADGGTNTAAMAENLKKIGTRFQIRIKVLDSLANSRDFRNLLKAYNRAASKLKKEKVENEHDWSGFW DNADGEVLKLARAGSPSQVDRWLNAIRPYIMAGIPVFWSVQLGIVPEPLRLSQTRGGHLRLIIGFDEEKKTLIFSDSWGA AHTEKEMPLADAIAITTGRQVMQPSK >Mature_426_residues MRFISAILPFLSVCCLLPSAWGAGNMAPDLKSGAFWKLPQPDLFGKYFNGEPGGWVDKGKTQLRIAKPSIKIGDMSLGEM LVNWKDGAPQSMTVMMYNKGDNGAIGKDEFDKRLELIKESLTALTGIQPKEYRASRKEAVVKVNGWSWIWDNGAITLEIN TSREGREFEAEFIRMKAGPTEDSIARGDASSRARKADIKQHVRKEGKRVVIQDIPMVDQGQKGYCVVATAARIFAYYGMD YVDQHELASLANTSADGGTNTAAMAENLKKIGTRFQIRIKVLDSLANSRDFRNLLKAYNRAASKLKKEKVENEHDWSGFW DNADGEVLKLARAGSPSQVDRWLNAIRPYIMAGIPVFWSVQLGIVPEPLRLSQTRGGHLRLIIGFDEEKKTLIFSDSWGA AHTEKEMPLADAIAITTGRQVMQPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47373; Mature: 47373
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFISAILPFLSVCCLLPSAWGAGNMAPDLKSGAFWKLPQPDLFGKYFNGEPGGWVDKGK CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC TQLRIAKPSIKIGDMSLGEMLVNWKDGAPQSMTVMMYNKGDNGAIGKDEFDKRLELIKES CEEEEECCCEEECCCCHHHHHEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHH LTALTGIQPKEYRASRKEAVVKVNGWSWIWDNGAITLEINTSREGREFEAEFIRMKAGPT HHHHHCCCCHHHHCCCCCEEEEECCEEEEEECCEEEEEEECCCCCCHHHHHHEEECCCCC EDSIARGDASSRARKADIKQHVRKEGKRVVIQDIPMVDQGQKGYCVVATAARIFAYYGMD HHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHCCC YVDQHELASLANTSADGGTNTAAMAENLKKIGTRFQIRIKVLDSLANSRDFRNLLKAYNR CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHH AASKLKKEKVENEHDWSGFWDNADGEVLKLARAGSPSQVDRWLNAIRPYIMAGIPVFWSV HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEE QLGIVPEPLRLSQTRGGHLRLIIGFDEEKKTLIFSDSWGAAHTEKEMPLADAIAITTGRQ EECCCCCCCHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHEEEECCHH VMQPSK HCCCCC >Mature Secondary Structure MRFISAILPFLSVCCLLPSAWGAGNMAPDLKSGAFWKLPQPDLFGKYFNGEPGGWVDKGK CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC TQLRIAKPSIKIGDMSLGEMLVNWKDGAPQSMTVMMYNKGDNGAIGKDEFDKRLELIKES CEEEEECCCEEECCCCHHHHHEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHH LTALTGIQPKEYRASRKEAVVKVNGWSWIWDNGAITLEINTSREGREFEAEFIRMKAGPT HHHHHCCCCHHHHCCCCCEEEEECCEEEEEECCEEEEEEECCCCCCHHHHHHEEECCCCC EDSIARGDASSRARKADIKQHVRKEGKRVVIQDIPMVDQGQKGYCVVATAARIFAYYGMD HHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHCCC YVDQHELASLANTSADGGTNTAAMAENLKKIGTRFQIRIKVLDSLANSRDFRNLLKAYNR CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHH AASKLKKEKVENEHDWSGFWDNADGEVLKLARAGSPSQVDRWLNAIRPYIMAGIPVFWSV HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEE QLGIVPEPLRLSQTRGGHLRLIIGFDEEKKTLIFSDSWGAAHTEKEMPLADAIAITTGRQ EECCCCCCCHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHEEEECCHH VMQPSK HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA