Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735191
Identifier: 187735191
GI number: 187735191
Start: 805480
End: 805983
Strand: Direct
Name: 187735191
Synonym: Amuc_0685
Alternate gene names: NA
Gene position: 805480-805983 (Clockwise)
Preceding gene: 187735189
Following gene: 187735192
Centisome position: 30.23
GC content: 48.02
Gene sequence:
>504_bases ATGAAAGAAATCAATATAGGTCAGGCGACGGCTATCACCTTTCCCAATCCTCTCGTGTTGGTTTGCACCAAAAAAGAGAA CGGTATGCTGAACATGGCTCCCGTTTCATTCTTCATGTACTCCTCGTTTAACCCTCCTATGCTGGCCTTTGCAATGGGTA AAACCGCCAATTCCGGCGAAAATATCCGCAAGACCGGCAAAGCCGTACTCGCTGCCCCTGGCGTCAGCTTGAAAGATGCG GTCATGGCTTACGGCTCTAAAAACGGCGGGCAGATTGACAAACTGAAGGAATTTCCAGTCGCTCTGCAAAACATTGACGG AACAGACATTCAGATCCCGGAGGACAGCCCTATTGCTTTTGTGGCATCGCTAGCTGAAACTGTGGAGTCTGGCAATCATT ACCTGTATCTCTGCAATATTGACAAAATAGTGGCGGACAAAACAAAAGAAGCCCTGTTCGCATGGAATGGTTATGCCAAA GTTGCCCCGGCACAGGAAAAATAA
Upstream 100 bases:
>100_bases TCAGAATAATATGCGTACTTGAAAAAAATTTTATCCTTAGTATAATTATCTTACTAATAGAAGTCAACAAGTAAAGTTAA ATATTTATAATCGTTTTACA
Downstream 100 bases:
>100_bases TTTGATGCCGTCAGCGGGGCTTTCATGGTTTTCTGTGAAAGCCCTGTTCTTTTCCAAATATCAAAATCTGGCGATGGGGA TGATATAATAAAGTGTATAA
Product: flavoprotein oxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKEINIGQATAITFPNPLVLVCTKKENGMLNMAPVSFFMYSSFNPPMLAFAMGKTANSGENIRKTGKAVLAAPGVSLKDA VMAYGSKNGGQIDKLKEFPVALQNIDGTDIQIPEDSPIAFVASLAETVESGNHYLYLCNIDKIVADKTKEALFAWNGYAK VAPAQEK
Sequences:
>Translated_167_residues MKEINIGQATAITFPNPLVLVCTKKENGMLNMAPVSFFMYSSFNPPMLAFAMGKTANSGENIRKTGKAVLAAPGVSLKDA VMAYGSKNGGQIDKLKEFPVALQNIDGTDIQIPEDSPIAFVASLAETVESGNHYLYLCNIDKIVADKTKEALFAWNGYAK VAPAQEK >Mature_167_residues MKEINIGQATAITFPNPLVLVCTKKENGMLNMAPVSFFMYSSFNPPMLAFAMGKTANSGENIRKTGKAVLAAPGVSLKDA VMAYGSKNGGQIDKLKEFPVALQNIDGTDIQIPEDSPIAFVASLAETVESGNHYLYLCNIDKIVADKTKEALFAWNGYAK VAPAQEK
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17950; Mature: 17950
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEINIGQATAITFPNPLVLVCTKKENGMLNMAPVSFFMYSSFNPPMLAFAMGKTANSGE CCCCCCCCEEEEECCCCEEEEEECCCCCEEEECHHEEEEECCCCCCEEEEEECCCCCCCC NIRKTGKAVLAAPGVSLKDAVMAYGSKNGGQIDKLKEFPVALQNIDGTDIQIPEDSPIAF HHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHCCCEEECCCCCEEECCCCCCHHH VASLAETVESGNHYLYLCNIDKIVADKTKEALFAWNGYAKVAPAQEK HHHHHHHHHCCCCEEEEEECCHHHHCCCHHEEEEECCEEECCCCCCC >Mature Secondary Structure MKEINIGQATAITFPNPLVLVCTKKENGMLNMAPVSFFMYSSFNPPMLAFAMGKTANSGE CCCCCCCCEEEEECCCCEEEEEECCCCCEEEECHHEEEEECCCCCCEEEEEECCCCCCCC NIRKTGKAVLAAPGVSLKDAVMAYGSKNGGQIDKLKEFPVALQNIDGTDIQIPEDSPIAF HHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHCCCEEECCCCCEEECCCCCCHHH VASLAETVESGNHYLYLCNIDKIVADKTKEALFAWNGYAKVAPAQEK HHHHHHHHHCCCCEEEEEECCHHHHCCCHHEEEEECCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA