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The map label for this gene is rmpM [H]

Identifier: 187735188

GI number: 187735188

Start: 801121

End: 802440

Strand: Direct

Name: rmpM [H]

Synonym: Amuc_0682

Alternate gene names: 187735188

Gene position: 801121-802440 (Clockwise)

Preceding gene: 187735187

Following gene: 187735189

Centisome position: 30.07

GC content: 58.94

Gene sequence:

>1320_bases
ATGAAAAACGCATCCACCATCACCGCCTTCATCATCAGCTTCCTGGTCGTAGGCAGCCTGGCCCTGGTTTTCCTGTTCCT
TGACAATAAGGAAGAGGAACCCGCCGCCGCTGAACCGGCGGCGCAAACGGAAGTGCCGGCACGCCAGACGGTAACGCCCC
AACCCACCGTCGACCCGCTTACCAAGGAAGATATCAGCCGGCAGACGGCTACGCCGCCCTCCCTGATCAATCTCAGCTCC
CCCCAGACACTGGCGCAGGCAATTGCCAAAGTCATTCAGGACCGGGATGAGGACATCCTGAAATCCCTGGAAATCCAGCA
GGCCGTGACGGAGAACCAGAGCCGCCTCATCCGGGAGCTCATGGAAGCCCGCCATATACGCCTTTCCTCTCCCGGCATCA
CCAGCATCGGCGCGAACAACCAGGGGGCCAATCCCACAGCCAGATACACGCTCAATTTCAGCAGCGGCGCGCGCGGCTAC
CTGGATATGAAGCGCAATGACAAGCAACAGTGGACGCTGGATACCCTCACTCTGCCCAGCAAGCAGGATCTGGCCAAGGA
CAAAGTCGCCCCCATGGCGATGAATGACCCCATGGGCATCGTCAGTTCCTTCATGGATGCCGTCGCCAAGGCGGATTTCC
GCGGGGCGAGGAAGTTCGTGGACGGAACTAAAGTGCAGGATGCCACGGTAGCCGGTTTGTGCATTCTGTTTGAGGAGGGG
GCTTTCCGGCTCCGGGAGGACGCTCCCATCAAAACCGCCTACGAAGCGCCCACCAATGCGGGGTTTTTCGTTCATCTTCA
GGACGCCCAGGGCAGGAAGGCCGGCAATGTAGGCCTGACCGTGGCCAAAACGGACGGACAATGGCTGGTTGCGGAAGCTT
CCCTGGACAGCATGCTGGAAGCTTATACGAAACGGCAGGGGGCCGGAGACGACATCTTTATCCCCATTGTAAAAAATCCC
CAGGGCGGCGATTCCCTGGCCCTGTTCTTCGGCTTTAATGAAGATACCCTTTCCAAGCGTTCCGAACGCCAGCTGCAAAT
CGTAGCGGAAGCTATCAAGATGGACAGTGGCAAGAAGCTGGAAATCAGCGGCCATACGGATGACGTGGGGAGCGAACGCT
ACAACCAGGGGCTCTCCGAACGCCGTGCGGCCGCCGTGAAAGCCCAGCTCGTCCAGTTCGGCGTTCCTGCGGAAAGAATC
GTTACCAAGGGATTCGGCAAATCTCAGCCGCGCCGAACCTACTCCCCCACGGCAGACGAAGAAACAAGGGATGAAGCCCG
CAAGGAAAACCGCCGCGCGGAAATGTACCTGGACTTTTAA

Upstream 100 bases:

>100_bases
AGATGTTATTCTGGTAATGAGCAACGGCGGTTTTGAAGGCATTCACGCCAAATTGCTGGAAGCACTGAACGCCTGACCCT
TCTTCATACATCCACTTCCA

Downstream 100 bases:

>100_bases
AAGAATCATCAGAGAGCAGAGAAGGGGCAAGCCTTTCCAACTTCTCTATTTACTGTTGCCTGTCAATTATTAACCATATT
CCATGGCTCGCCGATATGTC

Product: OmpA/MotB domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKNASTITAFIISFLVVGSLALVFLFLDNKEEEPAAAEPAAQTEVPARQTVTPQPTVDPLTKEDISRQTATPPSLINLSS
PQTLAQAIAKVIQDRDEDILKSLEIQQAVTENQSRLIRELMEARHIRLSSPGITSIGANNQGANPTARYTLNFSSGARGY
LDMKRNDKQQWTLDTLTLPSKQDLAKDKVAPMAMNDPMGIVSSFMDAVAKADFRGARKFVDGTKVQDATVAGLCILFEEG
AFRLREDAPIKTAYEAPTNAGFFVHLQDAQGRKAGNVGLTVAKTDGQWLVAEASLDSMLEAYTKRQGAGDDIFIPIVKNP
QGGDSLALFFGFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDVGSERYNQGLSERRAAAVKAQLVQFGVPAERI
VTKGFGKSQPRRTYSPTADEETRDEARKENRRAEMYLDF

Sequences:

>Translated_439_residues
MKNASTITAFIISFLVVGSLALVFLFLDNKEEEPAAAEPAAQTEVPARQTVTPQPTVDPLTKEDISRQTATPPSLINLSS
PQTLAQAIAKVIQDRDEDILKSLEIQQAVTENQSRLIRELMEARHIRLSSPGITSIGANNQGANPTARYTLNFSSGARGY
LDMKRNDKQQWTLDTLTLPSKQDLAKDKVAPMAMNDPMGIVSSFMDAVAKADFRGARKFVDGTKVQDATVAGLCILFEEG
AFRLREDAPIKTAYEAPTNAGFFVHLQDAQGRKAGNVGLTVAKTDGQWLVAEASLDSMLEAYTKRQGAGDDIFIPIVKNP
QGGDSLALFFGFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDVGSERYNQGLSERRAAAVKAQLVQFGVPAERI
VTKGFGKSQPRRTYSPTADEETRDEARKENRRAEMYLDF
>Mature_439_residues
MKNASTITAFIISFLVVGSLALVFLFLDNKEEEPAAAEPAAQTEVPARQTVTPQPTVDPLTKEDISRQTATPPSLINLSS
PQTLAQAIAKVIQDRDEDILKSLEIQQAVTENQSRLIRELMEARHIRLSSPGITSIGANNQGANPTARYTLNFSSGARGY
LDMKRNDKQQWTLDTLTLPSKQDLAKDKVAPMAMNDPMGIVSSFMDAVAKADFRGARKFVDGTKVQDATVAGLCILFEEG
AFRLREDAPIKTAYEAPTNAGFFVHLQDAQGRKAGNVGLTVAKTDGQWLVAEASLDSMLEAYTKRQGAGDDIFIPIVKNP
QGGDSLALFFGFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDVGSERYNQGLSERRAAAVKAQLVQFGVPAERI
VTKGFGKSQPRRTYSPTADEETRDEARKENRRAEMYLDF

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=85, Percent_Identity=38.8235294117647, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 48104; Mature: 48104

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNASTITAFIISFLVVGSLALVFLFLDNKEEEPAAAEPAAQTEVPARQTVTPQPTVDPL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
TKEDISRQTATPPSLINLSSPQTLAQAIAKVIQDRDEDILKSLEIQQAVTENQSRLIREL
CHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
MEARHIRLSSPGITSIGANNQGANPTARYTLNFSSGARGYLDMKRNDKQQWTLDTLTLPS
HHHHCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEECCC
KQDLAKDKVAPMAMNDPMGIVSSFMDAVAKADFRGARKFVDGTKVQDATVAGLCILFEEG
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEECC
AFRLREDAPIKTAYEAPTNAGFFVHLQDAQGRKAGNVGLTVAKTDGQWLVAEASLDSMLE
CCEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHH
AYTKRQGAGDDIFIPIVKNPQGGDSLALFFGFNEDTLSKRSERQLQIVAEAIKMDSGKKL
HHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEE
EISGHTDDVGSERYNQGLSERRAAAVKAQLVQFGVPAERIVTKGFGKSQPRRTYSPTADE
EECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCH
ETRDEARKENRRAEMYLDF
HHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MKNASTITAFIISFLVVGSLALVFLFLDNKEEEPAAAEPAAQTEVPARQTVTPQPTVDPL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
TKEDISRQTATPPSLINLSSPQTLAQAIAKVIQDRDEDILKSLEIQQAVTENQSRLIREL
CHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
MEARHIRLSSPGITSIGANNQGANPTARYTLNFSSGARGYLDMKRNDKQQWTLDTLTLPS
HHHHCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEECCC
KQDLAKDKVAPMAMNDPMGIVSSFMDAVAKADFRGARKFVDGTKVQDATVAGLCILFEEG
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEECC
AFRLREDAPIKTAYEAPTNAGFFVHLQDAQGRKAGNVGLTVAKTDGQWLVAEASLDSMLE
CCEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHH
AYTKRQGAGDDIFIPIVKNPQGGDSLALFFGFNEDTLSKRSERQLQIVAEAIKMDSGKKL
HHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEE
EISGHTDDVGSERYNQGLSERRAAAVKAQLVQFGVPAERIVTKGFGKSQPRRTYSPTADE
EECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCH
ETRDEARKENRRAEMYLDF
HHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]