| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is cysE [H]
Identifier: 187733561
GI number: 187733561
Start: 814471
End: 815016
Strand: Direct
Name: cysE [H]
Synonym: SbBS512_E0871
Alternate gene names: 187733561
Gene position: 814471-815016 (Clockwise)
Preceding gene: 187731311
Following gene: 187732475
Centisome position: 17.64
GC content: 36.26
Gene sequence:
>546_bases ATGAATATTAGTGAACTTAAAAAGTGCATACACTATGAAGTAATAGGTTGTAAACGCCCTTTCTCCTGGCGAAAAGCAAT TGTTCGCGCAATAAAACACAGAAGATCACGTTATTTATTTTGGTGGCGCATAGCAAAATATCTTTTTGATAAAGGCGGAT ACCGGCGAAAGATTGCAGGAAAAATAGAACGCTTCATTCTTGATAAATACAATGTAACCGTTCCCTTAACTGTAAATATT GGTAAAGGGTTCGACATATCTTATCTCAATGGCGTTGTTATCGGTCACAAAGTTACAATAGGTGAAAATTGTTCAATTAA GCCTGGGGTAACTATTGGACTTCGCGGTGAATTTAATGATATGGATATTGTCATAGGAAATAATGTAACCATTGGCTGTA ACGCCACCATCCTTGGTGGCAAAGTGCATATAGGGAATAATGTAAAAATAGGAGCTCATGCATTGGTACTGCATGACATT CCTGATGACTCCACATTCATTACCAAATTTCACTCTGAAATTATTTATAATTCATCTCACACATAA
Upstream 100 bases:
>100_bases ATTGCTCCGGCGTGAGAGTAATACAGTAAACTGTAGAAAAAGCCCATTAAACCTAATATAATAATAAGTTACAGAATTAT CTTTACTGAATAATAGATAT
Downstream 100 bases:
>100_bases TTCCGTTTAATCACAGCTCAGGCCATACGATATCCGGGGCTGTATTTATATCAATCCGACTCACTAATACCCGGTATTTT TTCCAGGAAGATAGCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRIAKYLFDKGGYRRKIAGKIERFILDKYNVTVPLTVNI GKGFDISYLNGVVIGHKVTIGENCSIKPGVTIGLRGEFNDMDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDI PDDSTFITKFHSEIIYNSSHT
Sequences:
>Translated_181_residues MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRIAKYLFDKGGYRRKIAGKIERFILDKYNVTVPLTVNI GKGFDISYLNGVVIGHKVTIGENCSIKPGVTIGLRGEFNDMDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDI PDDSTFITKFHSEIIYNSSHT >Mature_181_residues MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRIAKYLFDKGGYRRKIAGKIERFILDKYNVTVPLTVNI GKGFDISYLNGVVIGHKVTIGENCSIKPGVTIGLRGEFNDMDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDI PDDSTFITKFHSEIIYNSSHT
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788371, Length=150, Percent_Identity=31.3333333333333, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 20457; Mature: 20457
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRIAKYLFDKGGYRRKIAG CCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCEEHHHH KIERFILDKYNVTVPLTVNIGKGFDISYLNGVVIGHKVTIGENCSIKPGVTIGLRGEFND HHHHHHHHCCCEEEEEEEECCCCCCCHHHCEEEEEEEEEECCCCCCCCCEEEEECCCCCC MDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDIPDDSTFITKFHSEIIYNSSH EEEEECCCEEEECCEEEECCEEEECCCEEECEEEEEEEECCCCCHHHHHHHHHHEECCCC T C >Mature Secondary Structure MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRIAKYLFDKGGYRRKIAG CCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCEEHHHH KIERFILDKYNVTVPLTVNIGKGFDISYLNGVVIGHKVTIGENCSIKPGVTIGLRGEFND HHHHHHHHCCCEEEEEEEECCCCCCCHHHCEEEEEEEEEECCCCCCCCCEEEEECCCCCC MDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDIPDDSTFITKFHSEIIYNSSH EEEEECCCEEEECCEEEECCEEEECCCEEECEEEEEEEECCCCCHHHHHHHHHHEECCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]