| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is dinI [C]
Identifier: 187731311
GI number: 187731311
Start: 813906
End: 814154
Strand: Direct
Name: dinI [C]
Synonym: SbBS512_E0870
Alternate gene names: 187731311
Gene position: 813906-814154 (Clockwise)
Preceding gene: 187730204
Following gene: 187733561
Centisome position: 17.63
GC content: 43.37
Gene sequence:
>249_bases ATGCGTGTTGAGATCTGTATCGCTAAAGAAAAAATCACTAAAATGCCAAACGGTGCTGTGGATGCGTTAAAGGAAGAATT AACCCGACGCATCAGTAAACGTTATGACGATGTAGAGGTGATCGTAAAAGCCACCAGCAACGATGGCCTTTCTGTTACGC GCACCGCCGATAAAGATTCAGCTAAAACTTTTGTTCAGGAGACTCTGAAAGATACCTGGAAGTCTGCTGACGAGTGGTTT TTTCACTAA
Upstream 100 bases:
>100_bases CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAG CATCACCACAGGAGGGTGTT
Downstream 100 bases:
>100_bases TTAACACGTAAAATCGGTAACAGCTGGAAATCATTCAATACTCGCACTATCGAAAGTTCGCCAGCCAGCCGTGGCACGTT CTTGCATACGACGTGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWKSADEWF FH
Sequences:
>Translated_82_residues MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWKSADEWF FH >Mature_82_residues MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWKSADEWF FH
Specific function: Involved In Sos Regulation. Inhibits Reca By Preventing Reca To Bind Ssdna. Can Displace Ssdna From Reca. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dinI family [H]
Homologues:
Organism=Escherichia coli, GI1787300, Length=82, Percent_Identity=42.6829268292683, Blast_Score=62, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010391 [H]
Pfam domain/function: PF06183 DinI [H]
EC number: NA
Molecular weight: Translated: 9407; Mature: 9407
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDS CCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCEEEECCCCHH AKTFVQETLKDTWKSADEWFFH HHHHHHHHHHHHHCCHHHCCCC >Mature Secondary Structure MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDS CCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCEEEECCCCHH AKTFVQETLKDTWKSADEWFFH HHHHHHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111050; 11206551; 11258796 [H]