Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
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Accession | NC_010658 |
Length | 4,615,997 |
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The map label for this gene is wzb
Identifier: 187730901
GI number: 187730901
Start: 1073991
End: 1074434
Strand: Direct
Name: wzb
Synonym: SbBS512_E1171
Alternate gene names: 187730901
Gene position: 1073991-1074434 (Clockwise)
Preceding gene: 187731528
Following gene: 187731566
Centisome position: 23.27
GC content: 54.28
Gene sequence:
>444_bases ATGTTTAACAACATCTTAGTTGTCTGTGTCGGCAATATTTGCCGTTCCCCGACGGCGGAACGCTTACTGCAACGTTATCA CCCGGAGCTGAAAGTGGAGTCCGCTGGACTCGGCGCGCTGGTCGGTAAGGGCGCTGATCCTACCGCTATCAGCGTCGCCG CAGAACATCAACTGTCTCTGGAAGGTCACTGTGCACGGCAAATCAGCCGCCGCCTGTGTCGCAACTATGACCTGATTTTG ACCATGGAAAAGCGCCATATCGAACGCTTATGCGAGATGGCACCTGAGATGCGCGGCAAAGTGATGCTGTTTGGTCACTG GGATAACGAATGTGAAATCCCCGATCCGTATCGCAAAAGCCGGGAAACGTTTGCAGCGGTGTACACATTACTTGAACGGT CTGCCCGCCAGTGGGCGCAGGCATTGAACGCAGAGCAGGTATAA
Upstream 100 bases:
>100_bases TTTCCCGCTGGAACCGTCTGATCAATCAGTTGCTGCCAACTATTAGCGGTGTCCGTTACATGACGGATACAGCCAGCGAC ATTCATAACTGGTAATCGTC
Downstream 100 bases:
>100_bases GAATGACAGAAAAAGTAAAACAACATGCCGCTCCGGTAACGGGCAGTGATGAAATCGATATTGGTCGCCTGGTCGGCACC GTCATTGAAGCGCGCTGGTG
Product: tyrosine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLIL TMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV
Sequences:
>Translated_147_residues MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLIL TMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV >Mature_147_residues MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLIL TMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV
Specific function: Dephosphorylates wzc. Required for the extracellular polysaccharide colanic acid synthesis. Probably involved in the export of colanic acid from the cell to medium
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Homologues:
Organism=Homo sapiens, GI6005988, Length=147, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788375, Length=147, Percent_Identity=100, Blast_Score=306, Evalue=2e-85, Organism=Escherichia coli, GI87081812, Length=142, Percent_Identity=56.3380281690141, Blast_Score=159, Evalue=8e-41, Organism=Drosophila melanogaster, GI78706766, Length=139, Percent_Identity=32.3741007194245, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI78706768, Length=139, Percent_Identity=32.3741007194245, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI78706764, Length=127, Percent_Identity=33.0708661417323, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): WZB_ECO57 (P0AAB3)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: B90987 - PIR: E85832 - RefSeq: NP_288567.1 - RefSeq: NP_310893.1 - ProteinModelPortal: P0AAB3 - SMR: P0AAB3 - EnsemblBacteria: EBESCT00000027437 - EnsemblBacteria: EBESCT00000058441 - GeneID: 913690 - GeneID: 956740 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z3226 - KEGG: ecs:ECs2866 - GeneTree: EBGT00050000010250 - HOGENOM: HBG730979 - OMA: ENSRQIL - ProtClustDB: PRK10126 - BioCyc: ECOL83334:ECS2866-MONOMER - InterPro: IPR000106 - InterPro: IPR017867 - PANTHER: PTHR11717 - PRINTS: PR00719 - SMART: SM00226
Pfam domain/function: PF01451 LMWPc; SSF52788 Tyr_Pase_low_mol_wt
EC number: =3.1.3.48
Molecular weight: Translated: 16710; Mature: 16710
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: ACT_SITE 9-9 ACT_SITE 14-14 ACT_SITE 115-115
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSL CCCCEEEEEECHHHCCCHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCEEEEEHHCCCCC EGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKS CHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCHHHHH RETFAAVYTLLERSARQWAQALNAEQV HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSL CCCCEEEEEECHHHCCCHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCEEEEEHHCCCCC EGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKS CHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCHHHHH RETFAAVYTLLERSARQWAQALNAEQV HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796