Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is argH [H]
Identifier: 186476934
GI number: 186476934
Start: 2449844
End: 2451250
Strand: Direct
Name: argH [H]
Synonym: Bphy_2183
Alternate gene names: 186476934
Gene position: 2449844-2451250 (Clockwise)
Preceding gene: 186476933
Following gene: 186476935
Centisome position: 70.41
GC content: 64.61
Gene sequence:
>1407_bases ATGACGTCCCAACTGCATAAAAAAGGCGAAGCCTGGTCGGCTCGCTTCTCCGAGCCGATGTCGGAACTCGTCAAGCGCTA CACGTCGTCGGTATTCTTCGACAAGCGTCTCGCGCTCGTCGACATCGAAGGCTCGCTCGCGCACGCGTCGATGCTGGCCG CGCAAAAGATCATCAGCGCCGACGACCTCGCCGCGATCCAGCGCGGCATGGCGCAGATCCAGGGTGAAATCGAGCGCGGC GAGTTCGAATGGCAGCTCGATCTCGAAGACGTGCACCTGAACATCGAAGCGCGGCTCACCGCCCTGATCGGCGACGCAGG CAAGCGCCTGCACACGGGCCGCTCGCGCAACGACCAGGTCGCGACCGACATCCGCCTGTGGCTGCGCGGAGAAATCGACC GTATCGGCGATCTGCTGAAGGGCCTGCGCAGCGCGCTGCTCGATCTTGCAGAACAGAACGCGGACACGATCATGCCGGGC TTCACGCACCTGCAGGTCGCACAGCCAGTGACGTTCGGCCATCACCTGCTCGCCTACGTCGAAATGTTCTCACGTGACGC CGAGCGCATGCTCGACACCCGCAAGCGCGTGAACCGCCTGCCTCTCGGCGCAGCGGCGCTCGCCGGCACCAGCTACCCGA TCGACCGTCACGCCGTCGCGAAGACGCTCGGCTTCGACGGCATTTGCGCGAACTCGCTCGACGCCGTGTCCGATCGCGAC TTCGCGATCGAATTCACGGCCGCTTCGGCGCTCGTGATGACGCATGTGTCGCGCTTCTCGGAAGAACTCGTGCTGTGGAT GAGCCCGCGCGTCGGCTTCATCGATATTGCCGACCGCTTCTGCACCGGCTCGTCGATCATGCCGCAGAAGAAGAACCCCG ACGTGCCCGAACTCGCACGCGGCAAGACGGGCCGCGTCAACGGCCACCTGATGGCGCTGCTCACGCTGATGAAGGGCCAG CCGCTCGCATACAACAAGGACAATCAGGAAGACAAGGAACCGCTGTTCGATACCGTCGACACCGTCGCCGATACGCTGCG CATCTTCGCGGAGATGGTCGCGGGCATCACGGTGAAGTCGGAGAACATGCGCGGCGCAGCGCTGCAAGGCTTCTCGACGG CAACCGATCTCGCCGATTACCTCGTCAAGCGCGGCCTGCCGTTCCGCGACGCGCACGAAGCCGTCGCGCACGCAGTGAAG GTGTGCGACGATCGCGGCTGCGATCTGTCGGATCTGACGCTCGACGAAATGAAGGCGGAATTGCCGAACGTCGCTGCGCT GCTGGGCGACGACGTGTTCGGCTATCTCACGCTCGAAGGATCGGTTGCAAGCCGGAATCATGCGGGCGGCACGGCGCCGG ATCAGGTGCGCGCTGCCATCGCGGCTGCACGGGCTGCCCTCGGCTAA
Upstream 100 bases:
>100_bases GCGCCGCGGGTGTTAAAATCGTTGTCTCCTTCAAGGCGGCGCAGCACCAGGCACCCGTGCCGCGCCGTCCGCGTCTTCAC CTCGCATACTGCCCATCACC
Downstream 100 bases:
>100_bases CGCATTTTCCTGCCGATGCTCAAAGGCGAACTCTCTTGCGAGGGTTCGCCTTTTTTGTTGGTGGCGCAAACAAGCAGCGA CGAATGGCCGCCCTGCCCCG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIISADDLAAIQRGMAQIQGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGDLLKGLRSALLDLAEQNADTIMPG FTHLQVAQPVTFGHHLLAYVEMFSRDAERMLDTRKRVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD FAIEFTAASALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKSENMRGAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVK VCDDRGCDLSDLTLDEMKAELPNVAALLGDDVFGYLTLEGSVASRNHAGGTAPDQVRAAIAAARAALG
Sequences:
>Translated_468_residues MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIISADDLAAIQRGMAQIQGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGDLLKGLRSALLDLAEQNADTIMPG FTHLQVAQPVTFGHHLLAYVEMFSRDAERMLDTRKRVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD FAIEFTAASALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKSENMRGAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVK VCDDRGCDLSDLTLDEMKAELPNVAALLGDDVFGYLTLEGSVASRNHAGGTAPDQVRAAIAAARAALG >Mature_467_residues TSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIISADDLAAIQRGMAQIQGEIERGE FEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGDLLKGLRSALLDLAEQNADTIMPGF THLQVAQPVTFGHHLLAYVEMFSRDAERMLDTRKRVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRDF AIEFTAASALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQP LAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKSENMRGAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKV CDDRGCDLSDLTLDEMKAELPNVAALLGDDVFGYLTLEGSVASRNHAGGTAPDQVRAAIAAARAALG
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=461, Percent_Identity=40.1301518438178, Blast_Score=355, Evalue=6e-98, Organism=Homo sapiens, GI68303542, Length=461, Percent_Identity=40.1301518438178, Blast_Score=355, Evalue=6e-98, Organism=Homo sapiens, GI68303547, Length=461, Percent_Identity=37.9609544468547, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI68303549, Length=461, Percent_Identity=37.3101952277657, Blast_Score=311, Evalue=9e-85, Organism=Escherichia coli, GI1790398, Length=458, Percent_Identity=45.4148471615721, Blast_Score=400, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6321806, Length=459, Percent_Identity=40.958605664488, Blast_Score=342, Evalue=8e-95, Organism=Drosophila melanogaster, GI221473854, Length=445, Percent_Identity=38.6516853932584, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI78706858, Length=445, Percent_Identity=38.6516853932584, Blast_Score=311, Evalue=5e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 51070; Mature: 50939
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIISA CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCH DDLAAIQRGMAQIQGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH ATDIRLWLRGEIDRIGDLLKGLRSALLDLAEQNADTIMPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHH EMFSRDAERMLDTRKRVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC FAIEFTAASALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELAR EEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKS CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC ENMRGAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKVCDDRGCDLSDLTLDEMKAE CCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LPNVAALLGDDVFGYLTLEGSVASRNHAGGTAPDQVRAAIAAARAALG CCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIISA CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCH DDLAAIQRGMAQIQGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH ATDIRLWLRGEIDRIGDLLKGLRSALLDLAEQNADTIMPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHH EMFSRDAERMLDTRKRVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC FAIEFTAASALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELAR EEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKS CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC ENMRGAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKVCDDRGCDLSDLTLDEMKAE CCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LPNVAALLGDDVFGYLTLEGSVASRNHAGGTAPDQVRAAIAAARAALG CCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA