Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476933
Identifier: 186476933
GI number: 186476933
Start: 2448905
End: 2449717
Strand: Direct
Name: 186476933
Synonym: Bphy_2182
Alternate gene names: NA
Gene position: 2448905-2449717 (Clockwise)
Preceding gene: 186476931
Following gene: 186476934
Centisome position: 70.39
GC content: 69.37
Gene sequence:
>813_bases ATGACCACGTCGTCTCACGAAGATTCCGCCCCGCCGCTCGATGCGTCGCCCGCCCGCGCGCTCGGCGATTTCATTCGCGC ACATCGCGAGCGTCTGTCGCCGCAGGCCGTCGGGCTGCCGCCCGGCCCGCGCCGCCGGACGCCCGGCCTGCGTCGCGAAG AAGTCGCGCAGCTGTGCGGCGTGAGCCCGACCTGGTATACATGGATCGAACAGGGGCGGCCCGTGTCCGCGTCCGCCGAG GCCCTCGCGCGCATCGCCGTCGCGTTGCAGCTCTCGCGCGCTGAACGTGCGTATCTGTTCGAGCTGGCCGCGCAACGCGA TCCCGCCGAGCCCGACCCCGCCGCCTCCGATGCCCCCGCGATGCTGCTCAAGACCGTCCAGCTCGTGAACGCACCCGCGT ATGTGCTGGATCGCCAGTTCACCGCGCTCGCATGGAATGCGCCGGCATCGGACCTGTTCGTCGGCTGGCTCGATGGCGAG CACGACCGCAACCTGCTGCGCTACACGTTCCTGTCGCCGCAAGCCCGCCGCCTGATCGTCGATTGGGAGATCCGCGCGCG CCGCCTCGCCGCCGAATATCGCGCGGATTCGATCCGTCACCAGAACGACGCGCCCACGCGCTCGCTGATCGATTCGCTGT CCGCTGCCAGCGACGAGTTCGCGCGCTTCTGGGCGTCGCAGGACGTCAACGAGCGCGAAGGCGGCCAGCGCCAGTTCGAT CATCCGCGTGACGGCCACGTCGTCTATCACCAGATCACCTTCAAGCCCGCACACCGCGAGGACCTGAAGCTCGTCGTGCT CGTGCGCGAATGA
Upstream 100 bases:
>100_bases ACGCGCCGTTCATGTCGCTACAATAGAGCCCGCTCTGTACCGGTACAAGTCAAGCAATTATTCTGGTATCACGATTACCC GCCAACCGTCGTCCCGCATC
Downstream 100 bases:
>100_bases TCGCGTGCGCCGACGAAAAGCCGCCCGCGCCGCGGGTGTTAAAATCGTTGTCTCCTTCAAGGCGGCGCAGCACCAGGCAC CCGTGCCGCGCCGTCCGCGT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Protein; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTSSHEDSAPPLDASPARALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASAE ALARIAVALQLSRAERAYLFELAAQRDPAEPDPAASDAPAMLLKTVQLVNAPAYVLDRQFTALAWNAPASDLFVGWLDGE HDRNLLRYTFLSPQARRLIVDWEIRARRLAAEYRADSIRHQNDAPTRSLIDSLSAASDEFARFWASQDVNEREGGQRQFD HPRDGHVVYHQITFKPAHREDLKLVVLVRE
Sequences:
>Translated_270_residues MTTSSHEDSAPPLDASPARALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASAE ALARIAVALQLSRAERAYLFELAAQRDPAEPDPAASDAPAMLLKTVQLVNAPAYVLDRQFTALAWNAPASDLFVGWLDGE HDRNLLRYTFLSPQARRLIVDWEIRARRLAAEYRADSIRHQNDAPTRSLIDSLSAASDEFARFWASQDVNEREGGQRQFD HPRDGHVVYHQITFKPAHREDLKLVVLVRE >Mature_269_residues TTSSHEDSAPPLDASPARALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASAEA LARIAVALQLSRAERAYLFELAAQRDPAEPDPAASDAPAMLLKTVQLVNAPAYVLDRQFTALAWNAPASDLFVGWLDGEH DRNLLRYTFLSPQARRLIVDWEIRARRLAAEYRADSIRHQNDAPTRSLIDSLSAASDEFARFWASQDVNEREGGQRQFDH PRDGHVVYHQITFKPAHREDLKLVVLVRE
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30326; Mature: 30195
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSHEDSAPPLDASPARALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC VSPTWYTWIEQGRPVSASAEALARIAVALQLSRAERAYLFELAAQRDPAEPDPAASDAPA CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH MLLKTVQLVNAPAYVLDRQFTALAWNAPASDLFVGWLDGEHDRNLLRYTFLSPQARRLIV HHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEE DWEIRARRLAAEYRADSIRHQNDAPTRSLIDSLSAASDEFARFWASQDVNEREGGQRQFD EHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC HPRDGHVVYHQITFKPAHREDLKLVVLVRE CCCCCCEEEEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure TTSSHEDSAPPLDASPARALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC VSPTWYTWIEQGRPVSASAEALARIAVALQLSRAERAYLFELAAQRDPAEPDPAASDAPA CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH MLLKTVQLVNAPAYVLDRQFTALAWNAPASDLFVGWLDGEHDRNLLRYTFLSPQARRLIV HHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEE DWEIRARRLAAEYRADSIRHQNDAPTRSLIDSLSAASDEFARFWASQDVNEREGGQRQFD EHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC HPRDGHVVYHQITFKPAHREDLKLVVLVRE CCCCCCEEEEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA