Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476852
Identifier: 186476852
GI number: 186476852
Start: 2356916
End: 2357443
Strand: Direct
Name: 186476852
Synonym: Bphy_2098
Alternate gene names: NA
Gene position: 2356916-2357443 (Clockwise)
Preceding gene: 186476851
Following gene: 186476855
Centisome position: 67.74
GC content: 65.53
Gene sequence:
>528_bases ATGAACCGATATTGCGCACGCCGCCAGAATTTGACTGGCACCTGCCGCGCCATCAACACCGCCCCACTCGCCTTTACTGC CCGAACGCCATCGATGTTCAATCCCAGCCGCGACGAAGTCCGCCGTTTTTTCACCGACACCTGGCGCAAGCAGCGCGCGG GTGAAATCCTGACGCCGCTCGAAGCGATCGCCGCCGACTGGATCGTCGAGCACCCCGAGTACCACGCCGAACTCGCGGAT CCCGAGGCGGCTTCTGCACAGGACTACTCGCCCGAGCGCGGCCAGACCAACCCGTTCCTGCATCTGTCGATGCACCTCGC GATCAGCGAGCAACTGTCGATCGACCAGCCGCCCGGCATCCGCGGTGCGCACGACCGGCTCGCCGCACGGCTCGGCTCCA CGCACGACGCGCAGCACGCGATCATGGAGTGCCTTGGCGAAACGATCTGGGAAGCGCAGCGCACGAATACGCCGCCCGAC ACGGACGCCTATCTGCAGCGTATCGAGCGACGCGCATCACGCGACTGA
Upstream 100 bases:
>100_bases CGAAGACGCCGCCGCCGGATCTTTAAGCACGCTGCGCGGCGTTTCGTCGGGTTCGCGCGGCCGCGCCGTCCGCCTGCGTG CGATCGAGCCGGGGCGTAAA
Downstream 100 bases:
>100_bases CGCGACGAACGCCCGCCACACCCGCATCCGTCTCCCGAAAACAAACACCCCGCATGTGCGGGGTGTTTGTGTCGATGCAT GAGCCGGTGTGGCTGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNRYCARRQNLTGTCRAINTAPLAFTARTPSMFNPSRDEVRRFFTDTWRKQRAGEILTPLEAIAADWIVEHPEYHAELAD PEAASAQDYSPERGQTNPFLHLSMHLAISEQLSIDQPPGIRGAHDRLAARLGSTHDAQHAIMECLGETIWEAQRTNTPPD TDAYLQRIERRASRD
Sequences:
>Translated_175_residues MNRYCARRQNLTGTCRAINTAPLAFTARTPSMFNPSRDEVRRFFTDTWRKQRAGEILTPLEAIAADWIVEHPEYHAELAD PEAASAQDYSPERGQTNPFLHLSMHLAISEQLSIDQPPGIRGAHDRLAARLGSTHDAQHAIMECLGETIWEAQRTNTPPD TDAYLQRIERRASRD >Mature_175_residues MNRYCARRQNLTGTCRAINTAPLAFTARTPSMFNPSRDEVRRFFTDTWRKQRAGEILTPLEAIAADWIVEHPEYHAELAD PEAASAQDYSPERGQTNPFLHLSMHLAISEQLSIDQPPGIRGAHDRLAARLGSTHDAQHAIMECLGETIWEAQRTNTPPD TDAYLQRIERRASRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19837; Mature: 19837
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYCARRQNLTGTCRAINTAPLAFTARTPSMFNPSRDEVRRFFTDTWRKQRAGEILTPL CCCHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH EAIAADWIVEHPEYHAELADPEAASAQDYSPERGQTNPFLHLSMHLAISEQLSIDQPPGI HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCC RGAHDRLAARLGSTHDAQHAIMECLGETIWEAQRTNTPPDTDAYLQRIERRASRD CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNRYCARRQNLTGTCRAINTAPLAFTARTPSMFNPSRDEVRRFFTDTWRKQRAGEILTPL CCCHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH EAIAADWIVEHPEYHAELADPEAASAQDYSPERGQTNPFLHLSMHLAISEQLSIDQPPGI HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCC RGAHDRLAARLGSTHDAQHAIMECLGETIWEAQRTNTPPDTDAYLQRIERRASRD CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA