Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476679
Identifier: 186476679
GI number: 186476679
Start: 2168320
End: 2169207
Strand: Direct
Name: 186476679
Synonym: Bphy_1924
Alternate gene names: NA
Gene position: 2168320-2169207 (Clockwise)
Preceding gene: 186476677
Following gene: 186476681
Centisome position: 62.32
GC content: 63.85
Gene sequence:
>888_bases ATGAGCGAGAACAGCAAAATCGAATGGACAGACCACACGTTCAATCCGTGGGAAGGCTGCCAGAAGGTCGGGCCCGGCTG CGATCACTGCTACGCCGAGACGCGCAATGCGCGCTTCGCGGGCGGTACCGCTATCAACTGGGGACCGGGCGCGCCGCGGC GCCGCACGTCGCCTGCGAACTGGCGTAAGCCGCTGCACTGGAATGCGGTGCACGGGAACTTCCTCTATCAGCACGGTCGT CGCCAGCGCGTGTTCTGCGCATCGCTCGCGGACGTATTTGATAACGCCGTTGATCCGGCATGGCGCGCCGATCTCTTCGC GTTAATCAAGCAGACACCGAACCTCGACTGGCTGCTTCTGACCAAGCGCATCGGCAACGTCCCAGCGATGTTGGCAGAGA TCGGCATTACGGGCCTGCCGTGGAACGTGTGGCTCGGCGCGACCATCGTCAACCGGTCAGAGATGCTGCGCGACGCTGAA AAGCTTCTCACTGTGGAGGCGCGCGTGCGCTTCTGGAGCGTCGAACCGATGCTCGGCGACCTCGGAGACATACCATCCGA ACTGCTCCCAGACTGGGTCATCTGCGGCGGTGAAAGCGGCCATGGCGCGCGACCGATGCATCCCGACTGGGCGCGATCGC TGCGCGATCAATGCGATGCGGCCGGAGTTCAATTCCTGTTCAAGCAATGGGGCGAGTGGATGCCTGCCGACGCTGATGAC TGCGACCCGGGTATCGATAGTCGACGCCTGATGTGGAGCGACGGCGCCCCCTATTCAGAACAGGATGGCCAGCGCGCCGC AGCCCTCTTGGCACACGTCGGCAAGAAAGCCGCAGGCCGCCTGCTCGACGGCCGCACGCGCGATGGATTTCCGCGAGATG CGGCATGA
Upstream 100 bases:
>100_bases GCCTCGATGGATACCGTGATCATCGATTTGTATGTTTCCAGCGCATGGTCGTCTTTAAAGCTTGCACCCATAAAACCCCC GTTTTTCGAGGCATCGTAGC
Downstream 100 bases:
>100_bases GCGCGATCACAGCCCGCGCTCACGTCGATCCGCGGGCCGATCAACGCCTACCCGCCGAAGTCAGTTGCGCCGAGCAGAAC CATTGCGAGAGTCGGATTGG
Product: Gp37Gp68 family protein
Products: NA
Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; ABC Transporter Subunit; Phage ; ABC Transporter; Bacteriophage Protein; Phage Protein Gp; Phage Protein; Phage Gp
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSENSKIEWTDHTFNPWEGCQKVGPGCDHCYAETRNARFAGGTAINWGPGAPRRRTSPANWRKPLHWNAVHGNFLYQHGR RQRVFCASLADVFDNAVDPAWRADLFALIKQTPNLDWLLLTKRIGNVPAMLAEIGITGLPWNVWLGATIVNRSEMLRDAE KLLTVEARVRFWSVEPMLGDLGDIPSELLPDWVICGGESGHGARPMHPDWARSLRDQCDAAGVQFLFKQWGEWMPADADD CDPGIDSRRLMWSDGAPYSEQDGQRAAALLAHVGKKAAGRLLDGRTRDGFPRDAA
Sequences:
>Translated_295_residues MSENSKIEWTDHTFNPWEGCQKVGPGCDHCYAETRNARFAGGTAINWGPGAPRRRTSPANWRKPLHWNAVHGNFLYQHGR RQRVFCASLADVFDNAVDPAWRADLFALIKQTPNLDWLLLTKRIGNVPAMLAEIGITGLPWNVWLGATIVNRSEMLRDAE KLLTVEARVRFWSVEPMLGDLGDIPSELLPDWVICGGESGHGARPMHPDWARSLRDQCDAAGVQFLFKQWGEWMPADADD CDPGIDSRRLMWSDGAPYSEQDGQRAAALLAHVGKKAAGRLLDGRTRDGFPRDAA >Mature_294_residues SENSKIEWTDHTFNPWEGCQKVGPGCDHCYAETRNARFAGGTAINWGPGAPRRRTSPANWRKPLHWNAVHGNFLYQHGRR QRVFCASLADVFDNAVDPAWRADLFALIKQTPNLDWLLLTKRIGNVPAMLAEIGITGLPWNVWLGATIVNRSEMLRDAEK LLTVEARVRFWSVEPMLGDLGDIPSELLPDWVICGGESGHGARPMHPDWARSLRDQCDAAGVQFLFKQWGEWMPADADDC DPGIDSRRLMWSDGAPYSEQDGQRAAALLAHVGKKAAGRLLDGRTRDGFPRDAA
Specific function: Unknown
COG id: COG4422
COG function: function code S; Bacteriophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32938; Mature: 32807
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENSKIEWTDHTFNPWEGCQKVGPGCDHCYAETRNARFAGGTAINWGPGAPRRRTSPAN CCCCCCEEECCCCCCHHHHHHHCCCCHHHHHHHCCCCEECCCCEEECCCCCCCCCCCCCC WRKPLHWNAVHGNFLYQHGRRQRVFCASLADVFDNAVDPAWRADLFALIKQTPNLDWLLL CCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEE TKRIGNVPAMLAEIGITGLPWNVWLGATIVNRSEMLRDAEKLLTVEARVRFWSVEPMLGD EHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH LGDIPSELLPDWVICGGESGHGARPMHPDWARSLRDQCDAAGVQFLFKQWGEWMPADADD HCCCCHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC CDPGIDSRRLMWSDGAPYSEQDGQRAAALLAHVGKKAAGRLLDGRTRDGFPRDAA CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SENSKIEWTDHTFNPWEGCQKVGPGCDHCYAETRNARFAGGTAINWGPGAPRRRTSPAN CCCCCEEECCCCCCHHHHHHHCCCCHHHHHHHCCCCEECCCCEEECCCCCCCCCCCCCC WRKPLHWNAVHGNFLYQHGRRQRVFCASLADVFDNAVDPAWRADLFALIKQTPNLDWLLL CCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEE TKRIGNVPAMLAEIGITGLPWNVWLGATIVNRSEMLRDAEKLLTVEARVRFWSVEPMLGD EHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH LGDIPSELLPDWVICGGESGHGARPMHPDWARSLRDQCDAAGVQFLFKQWGEWMPADADD HCCCCHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC CDPGIDSRRLMWSDGAPYSEQDGQRAAALLAHVGKKAAGRLLDGRTRDGFPRDAA CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA