Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476677
Identifier: 186476677
GI number: 186476677
Start: 2167345
End: 2167923
Strand: Direct
Name: 186476677
Synonym: Bphy_1922
Alternate gene names: NA
Gene position: 2167345-2167923 (Clockwise)
Preceding gene: 186476676
Following gene: 186476679
Centisome position: 62.29
GC content: 59.93
Gene sequence:
>579_bases ATGACTGACAACAACAAGACTCTGCTTCCGTGCCCGTTTTGCGGTGCAACGCCGTTCCTACATCGAGGCGAAGGAATCGT CGGCATCTCATGCGGCCTCGACTCCGCATGCAATAAGACTGGGCTTTGCGTGGCATTCTCTCCCGAGAAAGAGGCTTCCG CGATCGACGCGTGGAATCGGCGCGCCGCCCCTGTCGCTGACAGCGCAGAAAAAAGCCCCGCTTCCAATGGAAAGCGAGGC AAGAACTGCGGGCATTCCGAGGGTTGCGTCTGGCCCGCTGACGACATGATCGACGAACAGCGCCCCGCGGTGATTCGGCA ATTTCCGAATGTCGATGCAGAAGCGTCTGCAATGGCGAAAGATGCAGAGCGGTATCGGTATCTGCGCCACTTCACGCGCG GCCAGCAGACTTTCGGTGGCGTATCGACTGGCGCTGCCCCCCGGCTGCAATGGTTCGAGTTTCCCGCTGTTGCGCCGCTT GGCAATGTCATGAAAGGCGCCGTATCTCAGCATCTCGACGAAGCCATCGACGCCGCTATCGCGGCATCCGCGCACAGGGC TGAACCTCGTGAATGTTGA
Upstream 100 bases:
>100_bases GGCAGCGCAAACATTTCGATCCGCACGGCGTGCTCTGGTACGACGACGCCTATGTGCTCGATCTCGTGCTCGAACGCATC CCGTTTTGAAGGAACAGCAA
Downstream 100 bases:
>100_bases AGCCAGCCACCAAGGCGCCGGCACTGAAGAAAGCGAGGCTAAAGACCACGCATCCCATACCGAATTTCAGAATGGGCATG TGCGAATCCGGCTCCTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTDNNKTLLPCPFCGATPFLHRGEGIVGISCGLDSACNKTGLCVAFSPEKEASAIDAWNRRAAPVADSAEKSPASNGKRG KNCGHSEGCVWPADDMIDEQRPAVIRQFPNVDAEASAMAKDAERYRYLRHFTRGQQTFGGVSTGAAPRLQWFEFPAVAPL GNVMKGAVSQHLDEAIDAAIAASAHRAEPREC
Sequences:
>Translated_192_residues MTDNNKTLLPCPFCGATPFLHRGEGIVGISCGLDSACNKTGLCVAFSPEKEASAIDAWNRRAAPVADSAEKSPASNGKRG KNCGHSEGCVWPADDMIDEQRPAVIRQFPNVDAEASAMAKDAERYRYLRHFTRGQQTFGGVSTGAAPRLQWFEFPAVAPL GNVMKGAVSQHLDEAIDAAIAASAHRAEPREC >Mature_191_residues TDNNKTLLPCPFCGATPFLHRGEGIVGISCGLDSACNKTGLCVAFSPEKEASAIDAWNRRAAPVADSAEKSPASNGKRGK NCGHSEGCVWPADDMIDEQRPAVIRQFPNVDAEASAMAKDAERYRYLRHFTRGQQTFGGVSTGAAPRLQWFEFPAVAPLG NVMKGAVSQHLDEAIDAAIAASAHRAEPREC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20531; Mature: 20400
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNNKTLLPCPFCGATPFLHRGEGIVGISCGLDSACNKTGLCVAFSPEKEASAIDAWNR CCCCCCEEEECCCCCCCCHHCCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCC RAAPVADSAEKSPASNGKRGKNCGHSEGCVWPADDMIDEQRPAVIRQFPNVDAEASAMAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHH DAERYRYLRHFTRGQQTFGGVSTGAAPRLQWFEFPAVAPLGNVMKGAVSQHLDEAIDAAI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH AASAHRAEPREC HHHHHCCCCCCC >Mature Secondary Structure TDNNKTLLPCPFCGATPFLHRGEGIVGISCGLDSACNKTGLCVAFSPEKEASAIDAWNR CCCCCEEEECCCCCCCCHHCCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCC RAAPVADSAEKSPASNGKRGKNCGHSEGCVWPADDMIDEQRPAVIRQFPNVDAEASAMAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHH DAERYRYLRHFTRGQQTFGGVSTGAAPRLQWFEFPAVAPLGNVMKGAVSQHLDEAIDAAI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH AASAHRAEPREC HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA