Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010622 |
Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476042
Identifier: 186476042
GI number: 186476042
Start: 1439272
End: 1440462
Strand: Reverse
Name: 186476042
Synonym: Bphy_1283
Alternate gene names: NA
Gene position: 1440462-1439272 (Counterclockwise)
Preceding gene: 186476043
Following gene: 186476041
Centisome position: 41.4
GC content: 61.71
Gene sequence:
>1191_bases ATGTTTCCTTCTCATCCGTTCGCTCCGCTTGTGATTCGCGGCCGCTCGTTGTTGCCCATCGTGCAGGGCGGTATGGGCGT CGGTGTGTCCGCGCACCGGCTCGCAGGCAGTGTGGCGCGCGAAGGCGCGCTCGGTACGATCGCCAGCATCGATCTGCGCC ACCATCATGACGACCTGCTCGAACGCTGTCGCGCAACGCCTGATCGTGCGACGCTCGAAGACGCAAACCGCGCGGCGCTC GTGCGCGAAATCCGGGCTGCGCGAAACCTCAGCGAAGGACGCGGCATGATCGCCGTCAACGTGATGAAGGCCGTCAACGC ACACGCAGACTACGTGCGTATCGCCTGCGAAGAAGGCGCGGACGCGATCGTGATGGGCGCGGGTCTGCCGCTCGATTTGC CCGATCTCACGCAAGGGCACGATATCGCGTTAGTTCCGATTCTCTCGGATAGCCGTGGTGTCGGCGTCGTGCTGAAGAAA TGGATGAAGAAGGGTCGTTTACCCGATGCCATCGTGATCGAGCATCCGGCGCATGCGGGTGGTCATCTCGGCGTAACGAA TCTCGACGACATGCACGATACGCGTTTCGATTTCGCCCGCGTCCTCAAAGAAGTCGACCAGCTCTTTACTTCCCTGCAGA TCAGCAGAACTCAAGTGCCCCTGATCCTGGCGGGCGGTATCAATAGTCACGAGGCAGTGCGCACTTGTCTTGAAGCTGGT GCGAATGGCGTGCAGATCGGTACGCCGTTCGCGGTCACGGAGGAGGGCGATGCGCATCCTCGTTTCAAGCGCGTGCTGGC CGATGCGACGCCGGACGATATCGTGGAGTTCGTCAGCGTAACGGGCTTGCCGGCGCGTGCCGTGAAGACACCGTGGCTCG ACCGCTATCTGCGTAACGAAACGCGGATACGCACGAAGGTTGGTGCACTGAAGCGGGCTTGTCCGACTGCACTCGAATGC CTGAGTGCATGCGGCTTACGCGACGGCATCGAAAAGTTCGGCCATTTTTGTATCGACACGCGGCTTGCAGCTGCCCTGCG CGGCGATGTGAACAACGGCCTGTTCTTCCGAGGCCGCGAAGCGTTGCCGTTTGGCAATGCGATCCGCAGTGTGCGCGATC TGCTCGAACTGCTGCTGACTGGAGCGGCGCGACCAGCGGTCGCAGGGCGAGTTGCGTTTTCCCTGGGTTGA
Upstream 100 bases:
>100_bases CCGACACGCGGGTTTTGTTTGATCTCAGGCAAGATACTGCATCTGCCAGTTGCGACCATCGAGGCTTTTCGTCGAATCCC GTCGACGACGGAGGCCTCAC
Downstream 100 bases:
>100_bases CGGGAGTCAAGGAGCTCGGATCGGGGAGCTTCGACAATGCTCTCGCGCGATGCTTTGCAACTCGCGCAACCATATAAAAA TTCAGGGTAGCTTATGAACA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase-Like Protein; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Dioxygenase; 2-Nitropropane Dioxygenase Npd; Enoyl-[Acyl-Carrier Protein] Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; Enoyl-[Acyl-Carrier-Protein] Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Trans-2-Enoyl-ACP Reductase FabK; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MFPSHPFAPLVIRGRSLLPIVQGGMGVGVSAHRLAGSVAREGALGTIASIDLRHHHDDLLERCRATPDRATLEDANRAAL VREIRAARNLSEGRGMIAVNVMKAVNAHADYVRIACEEGADAIVMGAGLPLDLPDLTQGHDIALVPILSDSRGVGVVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTNLDDMHDTRFDFARVLKEVDQLFTSLQISRTQVPLILAGGINSHEAVRTCLEAG ANGVQIGTPFAVTEEGDAHPRFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRTKVGALKRACPTALEC LSACGLRDGIEKFGHFCIDTRLAAALRGDVNNGLFFRGREALPFGNAIRSVRDLLELLLTGAARPAVAGRVAFSLG
Sequences:
>Translated_396_residues MFPSHPFAPLVIRGRSLLPIVQGGMGVGVSAHRLAGSVAREGALGTIASIDLRHHHDDLLERCRATPDRATLEDANRAAL VREIRAARNLSEGRGMIAVNVMKAVNAHADYVRIACEEGADAIVMGAGLPLDLPDLTQGHDIALVPILSDSRGVGVVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTNLDDMHDTRFDFARVLKEVDQLFTSLQISRTQVPLILAGGINSHEAVRTCLEAG ANGVQIGTPFAVTEEGDAHPRFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRTKVGALKRACPTALEC LSACGLRDGIEKFGHFCIDTRLAAALRGDVNNGLFFRGREALPFGNAIRSVRDLLELLLTGAARPAVAGRVAFSLG >Mature_396_residues MFPSHPFAPLVIRGRSLLPIVQGGMGVGVSAHRLAGSVAREGALGTIASIDLRHHHDDLLERCRATPDRATLEDANRAAL VREIRAARNLSEGRGMIAVNVMKAVNAHADYVRIACEEGADAIVMGAGLPLDLPDLTQGHDIALVPILSDSRGVGVVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTNLDDMHDTRFDFARVLKEVDQLFTSLQISRTQVPLILAGGINSHEAVRTCLEAG ANGVQIGTPFAVTEEGDAHPRFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRTKVGALKRACPTALEC LSACGLRDGIEKFGHFCIDTRLAAALRGDVNNGLFFRGREALPFGNAIRSVRDLLELLLTGAARPAVAGRVAFSLG
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42531; Mature: 42531
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPSHPFAPLVIRGRSLLPIVQGGMGVGVSAHRLAGSVAREGALGTIASIDLRHHHDDLL CCCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHH ERCRATPDRATLEDANRAALVREIRAARNLSEGRGMIAVNVMKAVNAHADYVRIACEEGA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEEEHHHHHHCCCCCEEEEEECCCC DAIVMGAGLPLDLPDLTQGHDIALVPILSDSRGVGVVLKKWMKKGRLPDAIVIEHPAHAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTNLDDMHDTRFDFARVLKEVDQLFTSLQISRTQVPLILAGGINSHEAVRTCLEAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCC ANGVQIGTPFAVTEEGDAHPRFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNE CCCEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRTKVGALKRACPTALECLSACGLRDGIEKFGHFCIDTRLAAALRGDVNNGLFFRGRE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC ALPFGNAIRSVRDLLELLLTGAARPAVAGRVAFSLG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEECC >Mature Secondary Structure MFPSHPFAPLVIRGRSLLPIVQGGMGVGVSAHRLAGSVAREGALGTIASIDLRHHHDDLL CCCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHH ERCRATPDRATLEDANRAALVREIRAARNLSEGRGMIAVNVMKAVNAHADYVRIACEEGA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEEEHHHHHHCCCCCEEEEEECCCC DAIVMGAGLPLDLPDLTQGHDIALVPILSDSRGVGVVLKKWMKKGRLPDAIVIEHPAHAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTNLDDMHDTRFDFARVLKEVDQLFTSLQISRTQVPLILAGGINSHEAVRTCLEAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCC ANGVQIGTPFAVTEEGDAHPRFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNE CCCEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRTKVGALKRACPTALECLSACGLRDGIEKFGHFCIDTRLAAALRGDVNNGLFFRGRE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC ALPFGNAIRSVRDLLELLLTGAARPAVAGRVAFSLG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA