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The map label for this gene is ompW [C]

Identifier: 186476041

GI number: 186476041

Start: 1438531

End: 1439178

Strand: Reverse

Name: ompW [C]

Synonym: Bphy_1282

Alternate gene names: 186476041

Gene position: 1439178-1438531 (Counterclockwise)

Preceding gene: 186476042

Following gene: 186476038

Centisome position: 41.37

GC content: 59.72

Gene sequence:

>648_bases
ATGAACACCACACTCCGATCGATCGCGGCCGCACTGTGCACGGCAGGGCTGGCGCTGATCTCCGCGCACGCCTTTGCCGC
CGACAGCGACCCGACCGCATCAGGTATCCATGCCGGTGACGTGCTCGTGCGCCTGCGCGCCATCTCCATCGTGCCGCAGG
TGCGCACCAGCGACGCATTGTCCACGCTGAATGTCGGCGTTAACAATGCGACCGTGCCTGAACTCGACTTCACATACATG
ATCCGCGACAACATCGGCGTCGAGCTGATTCTCGGCACATCGCGGCATCAGGTGACCTCCAGCCTCGGCGGGCTCGGCGG
CGTCAACGTGCTGCCGCCTACGCTGCTGTTGCAATATCATTTCAATCATCAGGGACAGGTCCGGCCGTATGTAGGTGCGG
GTGTGAACTATACGTATTTCTATAACGACGGACTGCATGTGGGCGATCAGCAGATTTCGGTCAAGCGCAGCAGCTTCGGT
CCGGCACTGCAGATGGGCGTCGACGTGCAAGTGACGAAATCCCTGTTCGCCAACGTCGATCTGAAGAAGGTCTGGATGAA
GACGGATGCATCGCTCAATGGCGCATCGCTTGGCACGTTGCATATCGATCCGTTGATCGTGGGCGTGGGTGTCGGGATGA
AGTTCTGA

Upstream 100 bases:

>100_bases
GGGTTGACGGGAGTCAAGGAGCTCGGATCGGGGAGCTTCGACAATGCTCTCGCGCGATGCTTTGCAACTCGCGCAACCAT
ATAAAAATTCAGGGTAGCTT

Downstream 100 bases:

>100_bases
ACATCGTTTGCATGAACGGATGTGCAATGAAAAACGCCGGCCTCGTCAAGAGCCGGCGTTTTTCATTGCACATCCAGGTA
ACCGATCGAACCGATGCGCG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNTTLRSIAAALCTAGLALISAHAFAADSDPTASGIHAGDVLVRLRAISIVPQVRTSDALSTLNVGVNNATVPELDFTYM
IRDNIGVELILGTSRHQVTSSLGGLGGVNVLPPTLLLQYHFNHQGQVRPYVGAGVNYTYFYNDGLHVGDQQISVKRSSFG
PALQMGVDVQVTKSLFANVDLKKVWMKTDASLNGASLGTLHIDPLIVGVGVGMKF

Sequences:

>Translated_215_residues
MNTTLRSIAAALCTAGLALISAHAFAADSDPTASGIHAGDVLVRLRAISIVPQVRTSDALSTLNVGVNNATVPELDFTYM
IRDNIGVELILGTSRHQVTSSLGGLGGVNVLPPTLLLQYHFNHQGQVRPYVGAGVNYTYFYNDGLHVGDQQISVKRSSFG
PALQMGVDVQVTKSLFANVDLKKVWMKTDASLNGASLGTLHIDPLIVGVGVGMKF
>Mature_215_residues
MNTTLRSIAAALCTAGLALISAHAFAADSDPTASGIHAGDVLVRLRAISIVPQVRTSDALSTLNVGVNNATVPELDFTYM
IRDNIGVELILGTSRHQVTSSLGGLGGVNVLPPTLLLQYHFNHQGQVRPYVGAGVNYTYFYNDGLHVGDQQISVKRSSFG
PALQMGVDVQVTKSLFANVDLKKVWMKTDASLNGASLGTLHIDPLIVGVGVGMKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=219, Percent_Identity=34.2465753424658, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22744; Mature: 22744

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTLRSIAAALCTAGLALISAHAFAADSDPTASGIHAGDVLVRLRAISIVPQVRTSDAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH
STLNVGVNNATVPELDFTYMIRDNIGVELILGTSRHQVTSSLGGLGGVNVLPPTLLLQYH
HEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEE
FNHQGQVRPYVGAGVNYTYFYNDGLHVGDQQISVKRSSFGPALQMGVDVQVTKSLFANVD
ECCCCCCCEEECCCCEEEEEECCCCEECCCEEEEECCCCCCHHHCCCCCEEHHHHHCCCC
LKKVWMKTDASLNGASLGTLHIDPLIVGVGVGMKF
HHHEEEECCCCCCCCEEEEEEECEEEEEECCCCCC
>Mature Secondary Structure
MNTTLRSIAAALCTAGLALISAHAFAADSDPTASGIHAGDVLVRLRAISIVPQVRTSDAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH
STLNVGVNNATVPELDFTYMIRDNIGVELILGTSRHQVTSSLGGLGGVNVLPPTLLLQYH
HEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEE
FNHQGQVRPYVGAGVNYTYFYNDGLHVGDQQISVKRSSFGPALQMGVDVQVTKSLFANVD
ECCCCCCCEEECCCCEEEEEECCCCEECCCEEEEECCCCCCHHHCCCCCEEHHHHHCCCC
LKKVWMKTDASLNGASLGTLHIDPLIVGVGVGMKF
HHHEEEECCCCCCCCEEEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]