Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476013

Identifier: 186476013

GI number: 186476013

Start: 1404574

End: 1405338

Strand: Reverse

Name: 186476013

Synonym: Bphy_1254

Alternate gene names: NA

Gene position: 1405338-1404574 (Counterclockwise)

Preceding gene: 186476014

Following gene: 186476012

Centisome position: 40.39

GC content: 68.1

Gene sequence:

>765_bases
ATGGCGGAAGTGGTGATTGTCGCGAGCGCGTTTGGAGCCGATGCGATCCGCAAGGACGGCCATCACGCATGGGTGAAGAC
AGCGGCGCAAGGGGGCGCAGCCGGTTTCGAAGTGCGCCGTGAGTTGTTTGCGCTGGAAGCGGAGGCCTCGTCGGAGGCGT
TGTCGGCGCTCGGCAAATCGATCGCGGTGAAAGGCCTGTGGTCGGTGTATTCGACGCCCGCCGAGCTGTACGCGTCCGAC
GGCGCGCTCGACGAAGCCGCGCTGCGTCAGGCGCTGATCGAAGCGACGGCGCTGGGCGCGCGTTTCGTCAAGCTGCAGCT
GGGCGGTTTCGCGGGGCGCGCGTGGGGCGACGCGATCGCAACGTGTACGAAAGGCCTCGCGGCGCGGCTCGTCGTCGAAA
ACGGACAGGTGGAGCGCGGCGGTTCGCTGGCGCAATTCGACGGGCTGTTCAATGCGCTCGCGAAGGAAGGCCGTCGCAAC
CTTGTCGGCATGACGTTCGATATCGGCAATTGGCAATGGCCCGGCGTCGATCCCGTCGAGGCGGCCCGCAAGCTCGCAGA
CCACGTCGAATACATCCATTGCAAGGCCGTCGCGGGTGAAGGCGCGCGCCGCTTCGCCGTCGCGCCCGCAGCGGACGATC
CCGTGTTCGCGGCGGTGCTGCCGCTGCTGCCGCGCCATGTACCGCGCGGCATCGAATTTCCGTTCGACGCCACGCGCCTC
GCCGCCGACGCGTCGCACTACGTCGCATGGCTCGCGTCCGCCTGA

Upstream 100 bases:

>100_bases
GATGGGCAGTATTTGCTTCAAGCGCAGTCGCGCTTTTTTGATATCCGTCTTTGGAACCGATTCCAAAGCATGTTTTCAAG
CAACAGAGCAAGGGATTGGC

Downstream 100 bases:

>100_bases
GCGCCGCAAGCGTCGACTGAATCACGAAGGAGAAGGCATGCATCCGACACTCGATGTCATCACCTACGGCGAAGCGATGG
CGATGTTCGTCGCGGCCGAA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Epimerase KguE; Sugar Isomerase; Sugar Phosphate Isomerases/Epimerase; Epimerase KguE-Like; Sugar Phosphate Isomerase/Epimerase; Sugar Or Sugar Phosphate Isomerase

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKSIAVKGLWSVYSTPAELYASD
GALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIATCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRN
LVGMTFDIGNWQWPGVDPVEAARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL
AADASHYVAWLASA

Sequences:

>Translated_254_residues
MAEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKSIAVKGLWSVYSTPAELYASD
GALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIATCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRN
LVGMTFDIGNWQWPGVDPVEAARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL
AADASHYVAWLASA
>Mature_253_residues
AEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKSIAVKGLWSVYSTPAELYASDG
ALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIATCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRNL
VGMTFDIGNWQWPGVDPVEAARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRLA
ADASHYVAWLASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26722; Mature: 26590

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKS
CCEEEEEEEHHCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
IAVKGLWSVYSTPAELYASDGALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIA
HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHH
TCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRNLVGMTFDIGNWQWPGVDPVE
HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCHHH
AARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL
HHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
AADASHYVAWLASA
HHHHHHHHHHEECC
>Mature Secondary Structure 
AEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKS
CEEEEEEEHHCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
IAVKGLWSVYSTPAELYASDGALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIA
HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHH
TCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRNLVGMTFDIGNWQWPGVDPVE
HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCHHH
AARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL
HHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
AADASHYVAWLASA
HHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA