Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476013
Identifier: 186476013
GI number: 186476013
Start: 1404574
End: 1405338
Strand: Reverse
Name: 186476013
Synonym: Bphy_1254
Alternate gene names: NA
Gene position: 1405338-1404574 (Counterclockwise)
Preceding gene: 186476014
Following gene: 186476012
Centisome position: 40.39
GC content: 68.1
Gene sequence:
>765_bases ATGGCGGAAGTGGTGATTGTCGCGAGCGCGTTTGGAGCCGATGCGATCCGCAAGGACGGCCATCACGCATGGGTGAAGAC AGCGGCGCAAGGGGGCGCAGCCGGTTTCGAAGTGCGCCGTGAGTTGTTTGCGCTGGAAGCGGAGGCCTCGTCGGAGGCGT TGTCGGCGCTCGGCAAATCGATCGCGGTGAAAGGCCTGTGGTCGGTGTATTCGACGCCCGCCGAGCTGTACGCGTCCGAC GGCGCGCTCGACGAAGCCGCGCTGCGTCAGGCGCTGATCGAAGCGACGGCGCTGGGCGCGCGTTTCGTCAAGCTGCAGCT GGGCGGTTTCGCGGGGCGCGCGTGGGGCGACGCGATCGCAACGTGTACGAAAGGCCTCGCGGCGCGGCTCGTCGTCGAAA ACGGACAGGTGGAGCGCGGCGGTTCGCTGGCGCAATTCGACGGGCTGTTCAATGCGCTCGCGAAGGAAGGCCGTCGCAAC CTTGTCGGCATGACGTTCGATATCGGCAATTGGCAATGGCCCGGCGTCGATCCCGTCGAGGCGGCCCGCAAGCTCGCAGA CCACGTCGAATACATCCATTGCAAGGCCGTCGCGGGTGAAGGCGCGCGCCGCTTCGCCGTCGCGCCCGCAGCGGACGATC CCGTGTTCGCGGCGGTGCTGCCGCTGCTGCCGCGCCATGTACCGCGCGGCATCGAATTTCCGTTCGACGCCACGCGCCTC GCCGCCGACGCGTCGCACTACGTCGCATGGCTCGCGTCCGCCTGA
Upstream 100 bases:
>100_bases GATGGGCAGTATTTGCTTCAAGCGCAGTCGCGCTTTTTTGATATCCGTCTTTGGAACCGATTCCAAAGCATGTTTTCAAG CAACAGAGCAAGGGATTGGC
Downstream 100 bases:
>100_bases GCGCCGCAAGCGTCGACTGAATCACGAAGGAGAAGGCATGCATCCGACACTCGATGTCATCACCTACGGCGAAGCGATGG CGATGTTCGTCGCGGCCGAA
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Epimerase KguE; Sugar Isomerase; Sugar Phosphate Isomerases/Epimerase; Epimerase KguE-Like; Sugar Phosphate Isomerase/Epimerase; Sugar Or Sugar Phosphate Isomerase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKSIAVKGLWSVYSTPAELYASD GALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIATCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRN LVGMTFDIGNWQWPGVDPVEAARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL AADASHYVAWLASA
Sequences:
>Translated_254_residues MAEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKSIAVKGLWSVYSTPAELYASD GALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIATCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRN LVGMTFDIGNWQWPGVDPVEAARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL AADASHYVAWLASA >Mature_253_residues AEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKSIAVKGLWSVYSTPAELYASDG ALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIATCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRNL VGMTFDIGNWQWPGVDPVEAARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRLA ADASHYVAWLASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26722; Mature: 26590
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKS CCEEEEEEEHHCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH IAVKGLWSVYSTPAELYASDGALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIA HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHH TCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRNLVGMTFDIGNWQWPGVDPVE HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCHHH AARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL HHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH AADASHYVAWLASA HHHHHHHHHHEECC >Mature Secondary Structure AEVVIVASAFGADAIRKDGHHAWVKTAAQGGAAGFEVRRELFALEAEASSEALSALGKS CEEEEEEEHHCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH IAVKGLWSVYSTPAELYASDGALDEAALRQALIEATALGARFVKLQLGGFAGRAWGDAIA HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHH TCTKGLAARLVVENGQVERGGSLAQFDGLFNALAKEGRRNLVGMTFDIGNWQWPGVDPVE HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCHHH AARKLADHVEYIHCKAVAGEGARRFAVAPAADDPVFAAVLPLLPRHVPRGIEFPFDATRL HHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH AADASHYVAWLASA HHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA