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The map label for this gene is rbsC [H]

Identifier: 186475994

GI number: 186475994

Start: 1386639

End: 1387670

Strand: Reverse

Name: rbsC [H]

Synonym: Bphy_1235

Alternate gene names: 186475994

Gene position: 1387670-1386639 (Counterclockwise)

Preceding gene: 186475995

Following gene: 186475993

Centisome position: 39.88

GC content: 65.41

Gene sequence:

>1032_bases
ATGAGCAATCAGAGAGTCACGGAGAAGGACGCGGGTGCGGCCACCGCCAGCACCGCCGATCCATCGGCGCCGCTCGCGAG
CGGCAAGCCCGCGGGCACACGTCTGGGCTTTTCGAACTACCTCGGCCTCGCGGGTGCGCTGGTCGCGATGATCGCGCTGT
TTTCGGTGCTGAGTTCGCACTTCCTGACGTACGACACGTTCATCACGATCGCGAACCAGATTCCCGATCTCGTGGTGATG
TCGGTGGGCATGACGTTCGTGCTGATCATCGCGGGCATCGACCTGTCCGTCGGCTCGGTTCTGGCGCTGGGCGCGTCCGT
CGTGAGTGTGGCCGCGCTGAAATGGCAGCTGGGGCCGTTCGCCGCGGCTGCGTTGGGTCTCGTCGCCGCGGCGCTGACGG
GCACGATCACGGGCGCGGTGACGGTGGGCTGGCGGATTCCGTCGTTCATCGTGTCGCTCGGCGTGCTGGAAGCGGCGCGC
GGTCTTGCGTACCAGATGACGAACTCGCGCACCGCGTACATCGGCGATGCGTTCGACTTCCTGTCCAACCCGATCGCCGT
GGGCATATCGCCGGCTTTCCTGATCGCGGTGGCCGTGATGATCGTCGCGCAGCTGGTGTTGACGCGCACGGTATTCGGCC
GCTATCTGGTCGGCATCGGCACGAACGAGGAAGCGGTGCGGCTCGCGGGCGTCAACCCGAAGCCGTATAAGGTGATCGTG
TTTGCATTGATGGGCGCGCTGTCTGGCCTCGCGGCACTGTTTCAGATCTCGCGCCTCGAAGCGGCTGATCCGAATGCGGG
CGCCGGCCTGGAACTGCAGGTGATCGCGGCTGTCGTGATTGGTGGCACGAGTCTGATGGGCGGGCGCGGTTCCGTCATCA
GTACGTTTTTCGGGGTGTTGATCATTTCGGTGCTGGCGGCGGGACTCGCGCAGATCGGCGCAAACGAGCCGACCAAGCGG
ATCATCACGGGTGCCGTGATCGTCGTCGCCGTCGTGCTGGACACCTACCGCAGCAGGCGCAAGCGCGGTTGA

Upstream 100 bases:

>100_bases
AGTGGACGCAGGACGCGCTGCTCGCCGCGGCATTCGCGGGCTATCGCAATCGCGAGGCGCTGCTGCACACGCACGACACC
CACGAAGGAGAGACGCAGTC

Downstream 100 bases:

>100_bases
GTACAGGGTGGCCGCCGTGGCGCGGGACGGCGGCCGCCTGGCAAGAACCTAACGAGAGCACCGCGGATGCAGCATGAGCT
GCATTGGCCAGCAGTAAAAA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSNQRVTEKDAGAATASTADPSAPLASGKPAGTRLGFSNYLGLAGALVAMIALFSVLSSHFLTYDTFITIANQIPDLVVM
SVGMTFVLIIAGIDLSVGSVLALGASVVSVAALKWQLGPFAAAALGLVAAALTGTITGAVTVGWRIPSFIVSLGVLEAAR
GLAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMIVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPKPYKVIV
FALMGALSGLAALFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR
IITGAVIVVAVVLDTYRSRRKRG

Sequences:

>Translated_343_residues
MSNQRVTEKDAGAATASTADPSAPLASGKPAGTRLGFSNYLGLAGALVAMIALFSVLSSHFLTYDTFITIANQIPDLVVM
SVGMTFVLIIAGIDLSVGSVLALGASVVSVAALKWQLGPFAAAALGLVAAALTGTITGAVTVGWRIPSFIVSLGVLEAAR
GLAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMIVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPKPYKVIV
FALMGALSGLAALFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR
IITGAVIVVAVVLDTYRSRRKRG
>Mature_342_residues
SNQRVTEKDAGAATASTADPSAPLASGKPAGTRLGFSNYLGLAGALVAMIALFSVLSSHFLTYDTFITIANQIPDLVVMS
VGMTFVLIIAGIDLSVGSVLALGASVVSVAALKWQLGPFAAAALGLVAAALTGTITGAVTVGWRIPSFIVSLGVLEAARG
LAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMIVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPKPYKVIVF
ALMGALSGLAALFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKRI
ITGAVIVVAVVLDTYRSRRKRG

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=301, Percent_Identity=36.8770764119601, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788896, Length=332, Percent_Identity=32.8313253012048, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790524, Length=315, Percent_Identity=32.0634920634921, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693152, Length=320, Percent_Identity=31.25, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082395, Length=240, Percent_Identity=33.75, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789992, Length=134, Percent_Identity=43.2835820895522, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI145693214, Length=257, Percent_Identity=31.9066147859922, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787794, Length=318, Percent_Identity=25.1572327044025, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788471, Length=336, Percent_Identity=29.4642857142857, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787793, Length=282, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35010; Mature: 34878

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQRVTEKDAGAATASTADPSAPLASGKPAGTRLGFSNYLGLAGALVAMIALFSVLSSH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLTYDTFITIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALGASVVSVAALKWQLGPF
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
AAAALGLVAAALTGTITGAVTVGWRIPSFIVSLGVLEAARGLAYQMTNSRTAYIGDAFDF
HHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHH
LSNPIAVGISPAFLIAVAVMIVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPKPYKVIV
HCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCHHHHH
FALMGALSGLAALFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IISVLAAGLAQIGANEPTKRIITGAVIVVAVVLDTYRSRRKRG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNQRVTEKDAGAATASTADPSAPLASGKPAGTRLGFSNYLGLAGALVAMIALFSVLSSH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLTYDTFITIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALGASVVSVAALKWQLGPF
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
AAAALGLVAAALTGTITGAVTVGWRIPSFIVSLGVLEAARGLAYQMTNSRTAYIGDAFDF
HHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHH
LSNPIAVGISPAFLIAVAVMIVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPKPYKVIV
HCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCHHHHH
FALMGALSGLAALFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IISVLAAGLAQIGANEPTKRIITGAVIVVAVVLDTYRSRRKRG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]