Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222763
Identifier: 183222763
GI number: 183222763
Start: 3542031
End: 3542519
Strand: Direct
Name: 183222763
Synonym: LEPBI_I3422
Alternate gene names: NA
Gene position: 3542031-3542519 (Clockwise)
Preceding gene: 183222761
Following gene: 183222765
Centisome position: 98.4
GC content: 38.45
Gene sequence:
>489_bases ATGGAAAAAGTAAATCATTTCAGAAATTACAGAGAAAGAAAGAACCTCACACGCATTCAATTATCAGAAAAATTGAATAT ACCTCGCTCAGCCATTGAGTTATTGGAATCGGAAGAATGGCTCCGGTCGAAATTTGATTATGTCGTTTTGGTCGCAAAAG AACTGGGGCTGTCTCTTATCGATCTCATTCGGAATGAATTTGATTATGATTTGGAACGCGAATTTTTTAACGAAGAGGAA TTTGAGGAAATCGTCGCTCGTTACGCCAATGCAAGAGTCACATTGATTCTATCTGAATTAAAATTATTCTGTCGCAATGC CAAAGTGCGTTTGGATGACTTTGATGTGACCGAACTTTCGTTCTCTATGGGAAGTTTGCATAAACTGATCACATTGAATC AAAAATTGGAACGAGGTGAAATCAGCACAAAGGATGCGCTTGTCGAATTTCCACCAAAATGGGGAAAGTTTAGCAACCGA AGTAACTGA
Upstream 100 bases:
>100_bases TCGAATCCATGCGAATCTTATTCATCCAAACCGTTGGAAACGTTTTTGGGGCCTTTTCAGAACGTAAATAACGGTTTTTT TCAATTTTTTTTAGGAACTC
Downstream 100 bases:
>100_bases AAACCACTTGTGGCCTACACCACAAGTTCGTCTTCTCCCGCACGAGCCACAACGATCTCGCCTGCTTCTTCCAGTTTACG GATGATGTTTACAATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVLVAKELGLSLIDLIRNEFDYDLEREFFNEEE FEEIVARYANARVTLILSELKLFCRNAKVRLDDFDVTELSFSMGSLHKLITLNQKLERGEISTKDALVEFPPKWGKFSNR SN
Sequences:
>Translated_162_residues MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVLVAKELGLSLIDLIRNEFDYDLEREFFNEEE FEEIVARYANARVTLILSELKLFCRNAKVRLDDFDVTELSFSMGSLHKLITLNQKLERGEISTKDALVEFPPKWGKFSNR SN >Mature_162_residues MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVLVAKELGLSLIDLIRNEFDYDLEREFFNEEE FEEIVARYANARVTLILSELKLFCRNAKVRLDDFDVTELSFSMGSLHKLITLNQKLERGEISTKDALVEFPPKWGKFSNR SN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19251; Mature: 19251
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVLVAKELGLSLI CCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHHCHHHH DLIRNEFDYDLEREFFNEEEFEEIVARYANARVTLILSELKLFCRNAKVRLDDFDVTELS HHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCHHHHH FSMGSLHKLITLNQKLERGEISTKDALVEFPPKWGKFSNRSN HHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCC >Mature Secondary Structure MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVLVAKELGLSLI CCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHHCHHHH DLIRNEFDYDLEREFFNEEEFEEIVARYANARVTLILSELKLFCRNAKVRLDDFDVTELS HHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCHHHHH FSMGSLHKLITLNQKLERGEISTKDALVEFPPKWGKFSNRSN HHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA