Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222760
Identifier: 183222760
GI number: 183222760
Start: 3540051
End: 3540374
Strand: Direct
Name: 183222760
Synonym: LEPBI_I3418
Alternate gene names: NA
Gene position: 3540051-3540374 (Clockwise)
Preceding gene: 183222759
Following gene: 183222761
Centisome position: 98.34
GC content: 39.2
Gene sequence:
>324_bases TTGGATCGAAAAAAATGTAATCTATTTTTGTTACTGATTTTTTTTCAACTAACATCGGTCAGCTGTGCAAACCCGGGTTT TGGTCCAAGAGGTTTGTTATTCACAAAAACAAAAATTGGTGTTTATGGGACAGGTGAACCTTCCAAAAGGCGAGTGACAT CTTGTGTCCACTCCATCTTAGGATTGGTTTCCTTTGGGGATGCGTCCTTCGAATTTTTAAAATCAAGATCTAAAATCCAG ACTGTAACAGAAACCAATTGGACCACTCTGGCCATTCTTGGAATGTATGCAAATCTCTGCGTCGAAATCTCAGGTAACGA ATGA
Upstream 100 bases:
>100_bases CCGTTAAAAAAACTTTGTGGAAACAAATTGATTCGGAAAAGAGGTGTATCCAAATCAAAAATAAACACAAAGATTTAATT TTAGAATAAAGGATCTAACT
Downstream 100 bases:
>100_bases AACATTCATTACTACGTTATATCAATTACATCATCATTGGAATGTGTTTGTCATCGATCCATTCCTGTGCCAATCTCGGA CAACCCCAAGGCCTTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDRKKCNLFLLLIFFQLTSVSCANPGFGPRGLLFTKTKIGVYGTGEPSKRRVTSCVHSILGLVSFGDASFEFLKSRSKIQ TVTETNWTTLAILGMYANLCVEISGNE
Sequences:
>Translated_107_residues MDRKKCNLFLLLIFFQLTSVSCANPGFGPRGLLFTKTKIGVYGTGEPSKRRVTSCVHSILGLVSFGDASFEFLKSRSKIQ TVTETNWTTLAILGMYANLCVEISGNE >Mature_107_residues MDRKKCNLFLLLIFFQLTSVSCANPGFGPRGLLFTKTKIGVYGTGEPSKRRVTSCVHSILGLVSFGDASFEFLKSRSKIQ TVTETNWTTLAILGMYANLCVEISGNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11773; Mature: 11773
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKKCNLFLLLIFFQLTSVSCANPGFGPRGLLFTKTKIGVYGTGEPSKRRVTSCVHSIL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEECCCCHHHHHHHHHHHHH GLVSFGDASFEFLKSRSKIQTVTETNWTTLAILGMYANLCVEISGNE HHHCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHEEEEECCCC >Mature Secondary Structure MDRKKCNLFLLLIFFQLTSVSCANPGFGPRGLLFTKTKIGVYGTGEPSKRRVTSCVHSIL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEECCCCHHHHHHHHHHHHH GLVSFGDASFEFLKSRSKIQTVTETNWTTLAILGMYANLCVEISGNE HHHCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA