Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222694
Identifier: 183222694
GI number: 183222694
Start: 3459160
End: 3460308
Strand: Direct
Name: 183222694
Synonym: LEPBI_I3350
Alternate gene names: NA
Gene position: 3459160-3460308 (Clockwise)
Preceding gene: 183222693
Following gene: 183222695
Centisome position: 96.1
GC content: 38.82
Gene sequence:
>1149_bases ATGCGAAGTCACTTCTTCAAACAAATCATACTTTATCTATTGGTTTCGATTCCTTTGTTGTCACAACCCGTGACACAAAC CAATCAAGATACGAACACTACCCAAAATCCTAGTCCTAAAAAATCTTTTTTTGGTTCACGACTTGCTGTCTTGGAACTGG CAGGAGAGTTTGTTCAAACTCCATCGGAAGGGGGACCACAATCGGTATCAAACATATTGAACTCAGCACGTGTTGCTTCC AGTTTTGTGAACAGTGGTACGACAACAAATAACCTAAACCCACCTGGTATCATAACAGAAAGTGCAGAGTCAAGACCTGC ATCCACCATTTCGCCACGAATCAAATATTCACATCAATTCACTGAAGATTTTTTTGTTGGTTTTGTTTATGCAAAAGGAG AACAGTACAATGATACAAGGACCAGCTTTAGTACCAATGGTTTGTATTTAAACGATCGGGTTCGGTCTGGAATCAACGAA GTTGGTTTTAAAATTGGTTTAGGTCCAATCAATTACCTAACCGATTCCTCTTCTACGGAACTCAGTTTTACATATTCGGA ACTTTCTTCCAAAGGACCATTCCAATCCTTCCAAATCAAGTTTCCATTTTTACGGACAGGTGATCAAAGTTTAACAGAAG GTTATGCGTTCTCTACTGGTAATGTAGAATTTAGAACTAAAAATTATGGAATGAATTATGGGTTTGCGGCATCAATTACA GATTGGCTGAATTTTTATATGATTGGTGATTTTACGATTTTTGCGGGACAATTAAAACTTTTGAATTATGGAATTGAAAC ATCATCTACTGGGACTTTGAATGGAAGCAACCAAGTTGTATTTAGTGCACCTGTCACCAAAACAGATCTCACAGCTTTCC AATCCAAGGAAGGTTTGATGCGAGGATTAGGAGGTGCCACGGTTTCCTTAGAATTGGGCCTTGTTTGGAAACTCTTTGAC ACAATGGGGATCAAATACGGTGGTTTTTATCAAATTTCGTCCTTTAGTGTTTCCGAAGTGGCTGGTTTCAATTTGGGATC TGGGAAAACTCCAGTGGAACTCAGTTCGGTCCCTGACATCAATTCCTCCCAAAGTTCCAAACAATTTGGTTCTTTTGGTG TGAATGTATCTCTTGTGAAAAACTTTTAA
Upstream 100 bases:
>100_bases AACGAAGTTTCCTTCTTATGATCTGAAATTTTTTTCCATACGACTTAGCTGATTTTATTTTTGAATCGATACCAAAACCA TCATTTGGATTTTTGAAAGT
Downstream 100 bases:
>100_bases TCTAGTTTCCTTGTCTTATTGATAGAGGATGAATCCTTCCTTAATAGGACAATCATGAAACACAAATCCATATTATATGC TCAAAAACTAGATTTCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRSHFFKQIILYLLVSIPLLSQPVTQTNQDTNTTQNPSPKKSFFGSRLAVLELAGEFVQTPSEGGPQSVSNILNSARVAS SFVNSGTTTNNLNPPGIITESAESRPASTISPRIKYSHQFTEDFFVGFVYAKGEQYNDTRTSFSTNGLYLNDRVRSGINE VGFKIGLGPINYLTDSSSTELSFTYSELSSKGPFQSFQIKFPFLRTGDQSLTEGYAFSTGNVEFRTKNYGMNYGFAASIT DWLNFYMIGDFTIFAGQLKLLNYGIETSSTGTLNGSNQVVFSAPVTKTDLTAFQSKEGLMRGLGGATVSLELGLVWKLFD TMGIKYGGFYQISSFSVSEVAGFNLGSGKTPVELSSVPDINSSQSSKQFGSFGVNVSLVKNF
Sequences:
>Translated_382_residues MRSHFFKQIILYLLVSIPLLSQPVTQTNQDTNTTQNPSPKKSFFGSRLAVLELAGEFVQTPSEGGPQSVSNILNSARVAS SFVNSGTTTNNLNPPGIITESAESRPASTISPRIKYSHQFTEDFFVGFVYAKGEQYNDTRTSFSTNGLYLNDRVRSGINE VGFKIGLGPINYLTDSSSTELSFTYSELSSKGPFQSFQIKFPFLRTGDQSLTEGYAFSTGNVEFRTKNYGMNYGFAASIT DWLNFYMIGDFTIFAGQLKLLNYGIETSSTGTLNGSNQVVFSAPVTKTDLTAFQSKEGLMRGLGGATVSLELGLVWKLFD TMGIKYGGFYQISSFSVSEVAGFNLGSGKTPVELSSVPDINSSQSSKQFGSFGVNVSLVKNF >Mature_382_residues MRSHFFKQIILYLLVSIPLLSQPVTQTNQDTNTTQNPSPKKSFFGSRLAVLELAGEFVQTPSEGGPQSVSNILNSARVAS SFVNSGTTTNNLNPPGIITESAESRPASTISPRIKYSHQFTEDFFVGFVYAKGEQYNDTRTSFSTNGLYLNDRVRSGINE VGFKIGLGPINYLTDSSSTELSFTYSELSSKGPFQSFQIKFPFLRTGDQSLTEGYAFSTGNVEFRTKNYGMNYGFAASIT DWLNFYMIGDFTIFAGQLKLLNYGIETSSTGTLNGSNQVVFSAPVTKTDLTAFQSKEGLMRGLGGATVSLELGLVWKLFD TMGIKYGGFYQISSFSVSEVAGFNLGSGKTPVELSSVPDINSSQSSKQFGSFGVNVSLVKNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41604; Mature: 41604
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSHFFKQIILYLLVSIPLLSQPVTQTNQDTNTTQNPSPKKSFFGSRLAVLELAGEFVQT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC PSEGGPQSVSNILNSARVASSFVNSGTTTNNLNPPGIITESAESRPASTISPRIKYSHQF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCC TEDFFVGFVYAKGEQYNDTRTSFSTNGLYLNDRVRSGINEVGFKIGLGPINYLTDSSSTE CCCEEEEEEEECCCCCCCCCCCCCCCCEEECHHHHCCHHHCCEEEECCCHHEECCCCCCE LSFTYSELSSKGPFQSFQIKFPFLRTGDQSLTEGYAFSTGNVEFRTKNYGMNYGFAASIT EEEEHHHHCCCCCCCEEEEEECEEECCCHHHHCCEEEECCCEEEEEECCCCCCCHHHHHH DWLNFYMIGDFTIFAGQLKLLNYGIETSSTGTLNGSNQVVFSAPVTKTDLTAFQSKEGLM HHHHEEEEECEEEEECEEEEEEECCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHH RGLGGATVSLELGLVWKLFDTMGIKYGGFYQISSFSVSEVAGFNLGSGKTPVELSSVPDI HHCCCCEEEEEHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCCCCEEECCCCCC NSSQSSKQFGSFGVNVSLVKNF CCCCCHHHHHCCCCEEEEEECC >Mature Secondary Structure MRSHFFKQIILYLLVSIPLLSQPVTQTNQDTNTTQNPSPKKSFFGSRLAVLELAGEFVQT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC PSEGGPQSVSNILNSARVASSFVNSGTTTNNLNPPGIITESAESRPASTISPRIKYSHQF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCC TEDFFVGFVYAKGEQYNDTRTSFSTNGLYLNDRVRSGINEVGFKIGLGPINYLTDSSSTE CCCEEEEEEEECCCCCCCCCCCCCCCCEEECHHHHCCHHHCCEEEECCCHHEECCCCCCE LSFTYSELSSKGPFQSFQIKFPFLRTGDQSLTEGYAFSTGNVEFRTKNYGMNYGFAASIT EEEEHHHHCCCCCCCEEEEEECEEECCCHHHHCCEEEECCCEEEEEECCCCCCCHHHHHH DWLNFYMIGDFTIFAGQLKLLNYGIETSSTGTLNGSNQVVFSAPVTKTDLTAFQSKEGLM HHHHEEEEECEEEEECEEEEEEECCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHH RGLGGATVSLELGLVWKLFDTMGIKYGGFYQISSFSVSEVAGFNLGSGKTPVELSSVPDI HHCCCCEEEEEHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCCCCEEECCCCCC NSSQSSKQFGSFGVNVSLVKNF CCCCCHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA