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The map label for this gene is ywdK [H]

Identifier: 183222683

GI number: 183222683

Start: 3446145

End: 3446576

Strand: Direct

Name: ywdK [H]

Synonym: LEPBI_I3339

Alternate gene names: 183222683

Gene position: 3446145-3446576 (Clockwise)

Preceding gene: 183222681

Following gene: 183222693

Centisome position: 95.73

GC content: 37.5

Gene sequence:

>432_bases
ATGAAACTTGTCAAGAAGCAATCAAACTTAGTTCTCATCCTACTCATTTGTTTCTCTGGATTTTTAGCCGTTGCCATCGG
AGCTTTCGGAGCACATGGCTTGAAAAACATCATACCGCCGGAATTAATGATAACATTTGAAACAGGGAACCGGTATCATT
TTTATCATAGCTTCGCAGCACTTCTCGCCTTTATCCTTTTACTACTTGCGGAAGGATACGAAGCACCAAAAAAATCCCTA
ACACATTTGAATTTTTCCGTTTGGTTCTTCTTGGTTGGAATTTTGATATTTTCTTTTAGTTTGTATGCACTTGCCATTAC
AGGCATTCGAATCCTTGGAGCCATCACTCCTTTTGGAGGAGTGAGTTTTCTCTTTGGTTGGATTTTTTTAGCTTTAGGGA
TGTATTATTTTTTAGTACCAAAAAAATACTGA

Upstream 100 bases:

>100_bases
GTTTTTTAACATCTTCTACACTGAGTTGTCGCCAAACTCTTACAAATTTAGTATTCTTTCCGGATGCATCTGCAGTCATA
GGCAATAGGAAGTATCCAAT

Downstream 100 bases:

>100_bases
CCTTGTTTGCTGATCAAGTTTCTGGAAATAAGTCCGTCAGCGATTAAGAGTAATCCTTCGGCGGCGGCCTTTTTCGATTC
CTCTGCGCTATCTTTCTGTA

Product: putative signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKLVKKQSNLVLILLICFSGFLAVAIGAFGAHGLKNIIPPELMITFETGNRYHFYHSFAALLAFILLLLAEGYEAPKKSL
THLNFSVWFFLVGILIFSFSLYALAITGIRILGAITPFGGVSFLFGWIFLALGMYYFLVPKKY

Sequences:

>Translated_143_residues
MKLVKKQSNLVLILLICFSGFLAVAIGAFGAHGLKNIIPPELMITFETGNRYHFYHSFAALLAFILLLLAEGYEAPKKSL
THLNFSVWFFLVGILIFSFSLYALAITGIRILGAITPFGGVSFLFGWIFLALGMYYFLVPKKY
>Mature_143_residues
MKLVKKQSNLVLILLICFSGFLAVAIGAFGAHGLKNIIPPELMITFETGNRYHFYHSFAALLAFILLLLAEGYEAPKKSL
THLNFSVWFFLVGILIFSFSLYALAITGIRILGAITPFGGVSFLFGWIFLALGMYYFLVPKKY

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=128, Percent_Identity=34.375, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 15980; Mature: 15980

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVKKQSNLVLILLICFSGFLAVAIGAFGAHGLKNIIPPELMITFETGNRYHFYHSFAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHH
LLAFILLLLAEGYEAPKKSLTHLNFSVWFFLVGILIFSFSLYALAITGIRILGAITPFGG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VSFLFGWIFLALGMYYFLVPKKY
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLVKKQSNLVLILLICFSGFLAVAIGAFGAHGLKNIIPPELMITFETGNRYHFYHSFAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHH
LLAFILLLLAEGYEAPKKSLTHLNFSVWFFLVGILIFSFSLYALAITGIRILGAITPFGG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VSFLFGWIFLALGMYYFLVPKKY
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]