Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222680
Identifier: 183222680
GI number: 183222680
Start: 3444116
End: 3445015
Strand: Direct
Name: 183222680
Synonym: LEPBI_I3336
Alternate gene names: NA
Gene position: 3444116-3445015 (Clockwise)
Preceding gene: 183222674
Following gene: 183222681
Centisome position: 95.68
GC content: 37.33
Gene sequence:
>900_bases ATGCAGAATCGATATTTTGAGATCTTTCGGCTCACAGCCTATTCGCTTGGTCTCGTTTACGTTTGTTCTTTTTTTTATTC CGTATTCTTTTTAGCCTTCGTGAACCATTCGGTTCTAAACCATAGAATTCCAGAAGAGCAAGTCCTTCCGCTTTATGAAG AATACTCTGAAGGGAAATTGGATTTTTCAGGCCTACTGACTGAATACCAAAAAATTGTAACTCCGATCAAAGACCAATTC CAAAAAGAAATCACCGAAAATCCAACTCTACTCTTCAGCCAATTTTATGAGATCGTTTTTACTGATAAACCCCATTACTT ATTAGGAATTTCCATTCCATGGTTTTTATGTTATGTGGGACTCGGGTATCTATTATACAAAAAAGTACTACAAATTCCGG TTACCAATTTACAAGACGAGTTGTCGATCCCGATTTTACTCCGGGGAATTACCAATGGTTTCATTTGTTTTTTTGTCGTT GTGGTCATTGGCGTGATCCTCGAAAAACTATCGGTTCCTTTAGAATCAGGTTTATTTGCCAAAAAATTGTACGAGTCCAT CCATGGAAACGGTTACCTACTGGCTTGGGGAATTTATGTTGTGGGCATCATCACGGGAATTTTGGAAGAAATCTTTTTTA GAGGATTTTTACTCAAAGCTTTTATCGATAAAAACCTTACACAAGAAGGGCTATTGATCGTATCCTTATTGTTTGGTTGG TTGCATTATGGTGAAGGGACTTCCATTGCAATACCTTTCATCATCTGCGGTGTAGGAATGTTTTTCGGTTATTTGTATAT CAAAACAGGAAATCTTTGGATTGCGATGGCATGTCATGCCACTTACAATTCTTTAGGATTAATCAATGCTTATCTTCAAT TACCAGTGGTCCAATCATGA
Upstream 100 bases:
>100_bases GAAAAACGACGCTTTTAGACATAATCTTCTAAAATGATTATCGACCTTTTCTCAAAAAAACGATGACGATTCTTGCCGAA ATTGAGGAACTGTAAGGCAG
Downstream 100 bases:
>100_bases AGTCATTTACTAAAGGATTTTTGATTCGCATAACAAAGGTCATACTTTTTCTTGCGTTACTTTTTATTCTACCAAATACA GTTTTTGCAGGGGAAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MQNRYFEIFRLTAYSLGLVYVCSFFYSVFFLAFVNHSVLNHRIPEEQVLPLYEEYSEGKLDFSGLLTEYQKIVTPIKDQF QKEITENPTLLFSQFYEIVFTDKPHYLLGISIPWFLCYVGLGYLLYKKVLQIPVTNLQDELSIPILLRGITNGFICFFVV VVIGVILEKLSVPLESGLFAKKLYESIHGNGYLLAWGIYVVGIITGILEEIFFRGFLLKAFIDKNLTQEGLLIVSLLFGW LHYGEGTSIAIPFIICGVGMFFGYLYIKTGNLWIAMACHATYNSLGLINAYLQLPVVQS
Sequences:
>Translated_299_residues MQNRYFEIFRLTAYSLGLVYVCSFFYSVFFLAFVNHSVLNHRIPEEQVLPLYEEYSEGKLDFSGLLTEYQKIVTPIKDQF QKEITENPTLLFSQFYEIVFTDKPHYLLGISIPWFLCYVGLGYLLYKKVLQIPVTNLQDELSIPILLRGITNGFICFFVV VVIGVILEKLSVPLESGLFAKKLYESIHGNGYLLAWGIYVVGIITGILEEIFFRGFLLKAFIDKNLTQEGLLIVSLLFGW LHYGEGTSIAIPFIICGVGMFFGYLYIKTGNLWIAMACHATYNSLGLINAYLQLPVVQS >Mature_299_residues MQNRYFEIFRLTAYSLGLVYVCSFFYSVFFLAFVNHSVLNHRIPEEQVLPLYEEYSEGKLDFSGLLTEYQKIVTPIKDQF QKEITENPTLLFSQFYEIVFTDKPHYLLGISIPWFLCYVGLGYLLYKKVLQIPVTNLQDELSIPILLRGITNGFICFFVV VVIGVILEKLSVPLESGLFAKKLYESIHGNGYLLAWGIYVVGIITGILEEIFFRGFLLKAFIDKNLTQEGLLIVSLLFGW LHYGEGTSIAIPFIICGVGMFFGYLYIKTGNLWIAMACHATYNSLGLINAYLQLPVVQS
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34130; Mature: 34130
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRYFEIFRLTAYSLGLVYVCSFFYSVFFLAFVNHSVLNHRIPEEQVLPLYEEYSEGKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCC DFSGLLTEYQKIVTPIKDQFQKEITENPTLLFSQFYEIVFTDKPHYLLGISIPWFLCYVG CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH LGYLLYKKVLQIPVTNLQDELSIPILLRGITNGFICFFVVVVIGVILEKLSVPLESGLFA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH KKLYESIHGNGYLLAWGIYVVGIITGILEEIFFRGFLLKAFIDKNLTQEGLLIVSLLFGW HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LHYGEGTSIAIPFIICGVGMFFGYLYIKTGNLWIAMACHATYNSLGLINAYLQLPVVQS HHCCCCCCCHHHHHHHHHHHHHHHHHEEECCEEEEEEEHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQNRYFEIFRLTAYSLGLVYVCSFFYSVFFLAFVNHSVLNHRIPEEQVLPLYEEYSEGKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCC DFSGLLTEYQKIVTPIKDQFQKEITENPTLLFSQFYEIVFTDKPHYLLGISIPWFLCYVG CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH LGYLLYKKVLQIPVTNLQDELSIPILLRGITNGFICFFVVVVIGVILEKLSVPLESGLFA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH KKLYESIHGNGYLLAWGIYVVGIITGILEEIFFRGFLLKAFIDKNLTQEGLLIVSLLFGW HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LHYGEGTSIAIPFIICGVGMFFGYLYIKTGNLWIAMACHATYNSLGLINAYLQLPVVQS HHCCCCCCCHHHHHHHHHHHHHHHHHEEECCEEEEEEEHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA