Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222674
Identifier: 183222674
GI number: 183222674
Start: 3438991
End: 3439683
Strand: Direct
Name: 183222674
Synonym: LEPBI_I3329
Alternate gene names: NA
Gene position: 3438991-3439683 (Clockwise)
Preceding gene: 183222673
Following gene: 183222680
Centisome position: 95.54
GC content: 34.2
Gene sequence:
>693_bases ATGAGTTCGAACTCGGAAAACCCAATCCCATCCAAGAGAATTAATGACGAAGTTTTAATGTCAGAAGAAAAAAAAGTTTC TAAATGGGAAACGATGACTTCTGGTATCTTTAGAAAGTTTTTAATCCTTCTCTTTGTTACATATTTATTCCCTGAATGTT CCAGCTTTGGTCCAAAAAATTCACAAAGTAGTTTGATAATCATTCAGATGACCATTGTAAAAGATGAAATGATCCTAGAC GAACTCATCGATCCTCGATTTCAAAAAGTCACTTTGCGTAAAGGGGAAAAATCAATTGAATACAGTGAAAGTTCCGGTCA TTATTATTACTTTCAAAATTTAAAAGAAGGTCAGTACGAAGTGTATGATGCCATTCATTTATTAAATCGTGGTGCATCTG ATTTTGCTTTTAGTAGTACAAAACAACCAAATAAAATCGATATCGACTTTGATATCGATACTGTAAGAAAGTCTAGAGTG GACTTACAACCAGGTACTGTTATCTTTATGGGCAGTTTTCACGTGACAGTGGATTTTAAATTCCAAGAAGAACCAAAGAT TACAATTCGTTATAGTAAAACCAACGAAGAAGAACTTGCCGCTATGGACCATTTACATAAAAATTTTCCAAGGTCAGGTT GGGGCCAGAAGGCAAAAAATCGAGTGAAGTTATTATCCTCTTTTGCTCAATAA
Upstream 100 bases:
>100_bases TTAAAAGCATCCGACTTGATTCTTTCCGATGAAATTTTATCAGAAATCAACCTTGTCACCAAAAAAATTCAATACCCAAT GGGTTAAGGACGGAATTCAA
Downstream 100 bases:
>100_bases AAGTAGCTCCCCAAAAAATCTAATCACACGATGGTAATCCAATCTGGATCTTGCAGGTGGGGAGTAGCATTCCAACTCAC GGGTTCCCATCCCTTCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSSNSENPIPSKRINDEVLMSEEKKVSKWETMTSGIFRKFLILLFVTYLFPECSSFGPKNSQSSLIIIQMTIVKDEMILD ELIDPRFQKVTLRKGEKSIEYSESSGHYYYFQNLKEGQYEVYDAIHLLNRGASDFAFSSTKQPNKIDIDFDIDTVRKSRV DLQPGTVIFMGSFHVTVDFKFQEEPKITIRYSKTNEEELAAMDHLHKNFPRSGWGQKAKNRVKLLSSFAQ
Sequences:
>Translated_230_residues MSSNSENPIPSKRINDEVLMSEEKKVSKWETMTSGIFRKFLILLFVTYLFPECSSFGPKNSQSSLIIIQMTIVKDEMILD ELIDPRFQKVTLRKGEKSIEYSESSGHYYYFQNLKEGQYEVYDAIHLLNRGASDFAFSSTKQPNKIDIDFDIDTVRKSRV DLQPGTVIFMGSFHVTVDFKFQEEPKITIRYSKTNEEELAAMDHLHKNFPRSGWGQKAKNRVKLLSSFAQ >Mature_229_residues SSNSENPIPSKRINDEVLMSEEKKVSKWETMTSGIFRKFLILLFVTYLFPECSSFGPKNSQSSLIIIQMTIVKDEMILDE LIDPRFQKVTLRKGEKSIEYSESSGHYYYFQNLKEGQYEVYDAIHLLNRGASDFAFSSTKQPNKIDIDFDIDTVRKSRVD LQPGTVIFMGSFHVTVDFKFQEEPKITIRYSKTNEEELAAMDHLHKNFPRSGWGQKAKNRVKLLSSFAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26636; Mature: 26504
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNSENPIPSKRINDEVLMSEEKKVSKWETMTSGIFRKFLILLFVTYLFPECSSFGPKN CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SQSSLIIIQMTIVKDEMILDELIDPRFQKVTLRKGEKSIEYSESSGHYYYFQNLKEGQYE CCCCEEEEEEEEHHHHHHHHHHCCCHHEEEHHHCCCCCCEECCCCCCEEEEECCCCCHHH VYDAIHLLNRGASDFAFSSTKQPNKIDIDFDIDTVRKSRVDLQPGTVIFMGSFHVTVDFK HHHHHHHHHCCCCCCEECCCCCCCEEEEEECHHHHHHHHCCCCCCEEEEEEEEEEEEEEE FQEEPKITIRYSKTNEEELAAMDHLHKNFPRSGWGQKAKNRVKLLSSFAQ ECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SSNSENPIPSKRINDEVLMSEEKKVSKWETMTSGIFRKFLILLFVTYLFPECSSFGPKN CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SQSSLIIIQMTIVKDEMILDELIDPRFQKVTLRKGEKSIEYSESSGHYYYFQNLKEGQYE CCCCEEEEEEEEHHHHHHHHHHCCCHHEEEHHHCCCCCCEECCCCCCEEEEECCCCCHHH VYDAIHLLNRGASDFAFSSTKQPNKIDIDFDIDTVRKSRVDLQPGTVIFMGSFHVTVDFK HHHHHHHHHCCCCCCEECCCCCCCEEEEEECHHHHHHHHCCCCCCEEEEEEEEEEEEEEE FQEEPKITIRYSKTNEEELAAMDHLHKNFPRSGWGQKAKNRVKLLSSFAQ ECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA