Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222616
Identifier: 183222616
GI number: 183222616
Start: 3384071
End: 3385504
Strand: Direct
Name: 183222616
Synonym: LEPBI_I3271
Alternate gene names: NA
Gene position: 3384071-3385504 (Clockwise)
Preceding gene: 183222615
Following gene: 183222619
Centisome position: 94.01
GC content: 35.08
Gene sequence:
>1434_bases GTGGCTTACGCCTCGTTTTTTATTATATCAATTTTATACTGTCTCCAGGTTGGAATCAACATAGGTGTCCTTCCTGTCGT ATGGCCTGATGAAGTACTATTCTATTCACCTGCTATCTCGTTTGCAAACACTGGACACTTAAAAACAGAAGTCCTATCAG GACTCATTCCAGGTATGGAATCCAAAACACTTTGGATGCCACCTTTTTATCTTTTGTTTTCTGGATTCACTTTAACCATT TTCCCTGATTCAATCCTTACACTTCGCATAGCAAACGTTTGCATTGTTTATTTAACTGCCTTTGGATTCTACCGATTATT AAAACGTTTTTTTATTCCTGAGTTTGGCGCACAGATTGCATTTGCGAGTTTGCTTTGGGAGCCACTTCTCTTTCGTTTTG GAACAGTCGCCAGAATGGAAGCACTCACTGCGTTTTTATTTATACTAAGTTTATTTTTTGCTACGAACAAAAAAGTAAAC AAATGGAATCCTTTTTTTGCTGGAGTCTTATTATCATTGTCAGCTCTTTCTCATCCGATTGGAGCTTCATTTGGACTTGT AACACTTTTTCTGGTGTATCAAAATTTTAAATTAAAAAATATCGTCTGGTTTTTATTAGGTGGGATTTTTCCGATTCTCT GTTGGATGGTTTATATTCATCCTAATTGGGATTGGTTTCAAATTCAATTTGGGGCACAACTCACAAGAAAACAAAACTTA CTCAATACATTTACCATCATTGATAAAATTAAAATTTTCTCATTTGGTTTTGGTTTTCCGAAAATCAGAATACTAATCAT ATTGATTCAATTATTTTTATTATCATTTTTTACATATAAACAAATCCGAAACAATGGAACTTTATTAAATTCATGGTTAC TATTTTGGATATGGACCATTTCTGTGTTTGCGGCATTATACACGTCTTCAGAAGGATGGTATGTTTATCATAGTTTATTC CCATTATCTTTGGGAATGGCATTGTTAGTACAAGAAAGAACATTTGTGAATCGACTCCCTGTCATTGGGATCAGTTTATC TTTATTTGCACTTGTATCAATGCACCATATCCATTGGTCCAAAACCAATTCCCTCGAGATACAAACATCGCACTTCCAAC ACATTCAGAGAAGTTTGAGCCAATCGAATGCCGTTTACCTACAAAGTTTACCCGATCCTTATTTTTATCTCAAATCCAAA CGACCTGACTTGGATATTTTAGAATTCATTCCAGGCGAATTAGAGATCCCCTCTGAAACATATATCAATACCATTCGTTC AAGAGATAGTTTTGTTTTTTACGATGAAACTTTGATCAATGAAACAATCAAAGACTATCTGAAGCAAGGGAGTTGGATTC GGGAAGAATGGGAAATTCCTGTTCCATCCAACCATTGGTTGCACTACAAAACCATTGTTTATACGAAGAAGTAA
Upstream 100 bases:
>100_bases CCTGTGAAAAAGGTTTTTGATGTTGTAGAACTTTTGGATTTGTTTGAAGTTTTTGAGACGGAACAAGAAGCCGTTAATTC TCTTTCAAAGTAGACCGAAC
Downstream 100 bases:
>100_bases TTCATTTCGTTCTACCAAATGAAGGTAAAAGAATTAGGAATTTAAATCCGCTAAAATCTTTAATCCTTTTAATGTCATCA TAGGATCAATTTCATCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MAYASFFIISILYCLQVGINIGVLPVVWPDEVLFYSPAISFANTGHLKTEVLSGLIPGMESKTLWMPPFYLLFSGFTLTI FPDSILTLRIANVCIVYLTAFGFYRLLKRFFIPEFGAQIAFASLLWEPLLFRFGTVARMEALTAFLFILSLFFATNKKVN KWNPFFAGVLLSLSALSHPIGASFGLVTLFLVYQNFKLKNIVWFLLGGIFPILCWMVYIHPNWDWFQIQFGAQLTRKQNL LNTFTIIDKIKIFSFGFGFPKIRILIILIQLFLLSFFTYKQIRNNGTLLNSWLLFWIWTISVFAALYTSSEGWYVYHSLF PLSLGMALLVQERTFVNRLPVIGISLSLFALVSMHHIHWSKTNSLEIQTSHFQHIQRSLSQSNAVYLQSLPDPYFYLKSK RPDLDILEFIPGELEIPSETYINTIRSRDSFVFYDETLINETIKDYLKQGSWIREEWEIPVPSNHWLHYKTIVYTKK
Sequences:
>Translated_477_residues MAYASFFIISILYCLQVGINIGVLPVVWPDEVLFYSPAISFANTGHLKTEVLSGLIPGMESKTLWMPPFYLLFSGFTLTI FPDSILTLRIANVCIVYLTAFGFYRLLKRFFIPEFGAQIAFASLLWEPLLFRFGTVARMEALTAFLFILSLFFATNKKVN KWNPFFAGVLLSLSALSHPIGASFGLVTLFLVYQNFKLKNIVWFLLGGIFPILCWMVYIHPNWDWFQIQFGAQLTRKQNL LNTFTIIDKIKIFSFGFGFPKIRILIILIQLFLLSFFTYKQIRNNGTLLNSWLLFWIWTISVFAALYTSSEGWYVYHSLF PLSLGMALLVQERTFVNRLPVIGISLSLFALVSMHHIHWSKTNSLEIQTSHFQHIQRSLSQSNAVYLQSLPDPYFYLKSK RPDLDILEFIPGELEIPSETYINTIRSRDSFVFYDETLINETIKDYLKQGSWIREEWEIPVPSNHWLHYKTIVYTKK >Mature_476_residues AYASFFIISILYCLQVGINIGVLPVVWPDEVLFYSPAISFANTGHLKTEVLSGLIPGMESKTLWMPPFYLLFSGFTLTIF PDSILTLRIANVCIVYLTAFGFYRLLKRFFIPEFGAQIAFASLLWEPLLFRFGTVARMEALTAFLFILSLFFATNKKVNK WNPFFAGVLLSLSALSHPIGASFGLVTLFLVYQNFKLKNIVWFLLGGIFPILCWMVYIHPNWDWFQIQFGAQLTRKQNLL NTFTIIDKIKIFSFGFGFPKIRILIILIQLFLLSFFTYKQIRNNGTLLNSWLLFWIWTISVFAALYTSSEGWYVYHSLFP LSLGMALLVQERTFVNRLPVIGISLSLFALVSMHHIHWSKTNSLEIQTSHFQHIQRSLSQSNAVYLQSLPDPYFYLKSKR PDLDILEFIPGELEIPSETYINTIRSRDSFVFYDETLINETIKDYLKQGSWIREEWEIPVPSNHWLHYKTIVYTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55397; Mature: 55266
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYASFFIISILYCLQVGINIGVLPVVWPDEVLFYSPAISFANTGHLKTEVLSGLIPGME CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCC SKTLWMPPFYLLFSGFTLTIFPDSILTLRIANVCIVYLTAFGFYRLLKRFFIPEFGAQIA CCEEECCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FASLLWEPLLFRFGTVARMEALTAFLFILSLFFATNKKVNKWNPFFAGVLLSLSALSHPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC GASFGLVTLFLVYQNFKLKNIVWFLLGGIFPILCWMVYIHPNWDWFQIQFGAQLTRKQNL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECHHHHHHHHH LNTFTIIDKIKIFSFGFGFPKIRILIILIQLFLLSFFTYKQIRNNGTLLNSWLLFWIWTI HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SVFAALYTSSEGWYVYHSLFPLSLGMALLVQERTFVNRLPVIGISLSLFALVSMHHIHWS HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEC KTNSLEIQTSHFQHIQRSLSQSNAVYLQSLPDPYFYLKSKRPDLDILEFIPGELEIPSET CCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCCCCHHH YINTIRSRDSFVFYDETLINETIKDYLKQGSWIREEWEIPVPSNHWLHYKTIVYTKK HHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure AYASFFIISILYCLQVGINIGVLPVVWPDEVLFYSPAISFANTGHLKTEVLSGLIPGME CHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCC SKTLWMPPFYLLFSGFTLTIFPDSILTLRIANVCIVYLTAFGFYRLLKRFFIPEFGAQIA CCEEECCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FASLLWEPLLFRFGTVARMEALTAFLFILSLFFATNKKVNKWNPFFAGVLLSLSALSHPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC GASFGLVTLFLVYQNFKLKNIVWFLLGGIFPILCWMVYIHPNWDWFQIQFGAQLTRKQNL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECHHHHHHHHH LNTFTIIDKIKIFSFGFGFPKIRILIILIQLFLLSFFTYKQIRNNGTLLNSWLLFWIWTI HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SVFAALYTSSEGWYVYHSLFPLSLGMALLVQERTFVNRLPVIGISLSLFALVSMHHIHWS HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEC KTNSLEIQTSHFQHIQRSLSQSNAVYLQSLPDPYFYLKSKRPDLDILEFIPGELEIPSET CCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCCCCHHH YINTIRSRDSFVFYDETLINETIKDYLKQGSWIREEWEIPVPSNHWLHYKTIVYTKK HHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA