Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is yjgN [C]
Identifier: 183222604
GI number: 183222604
Start: 3372616
End: 3373650
Strand: Direct
Name: yjgN [C]
Synonym: LEPBI_I3259
Alternate gene names: 183222604
Gene position: 3372616-3373650 (Clockwise)
Preceding gene: 183222601
Following gene: 183222605
Centisome position: 93.69
GC content: 39.03
Gene sequence:
>1035_bases ATGGTTTGGAAATATTTTTCTTTACCCAATTCGAAGATAGTGGATACTCTGGACACTAATTATCCTTTGGGGAAATCAAT GAGCAATACAAGACTACAATACCACGCCACTGGCGGACAACTCTTCATGCTATTTTTGAAGAATATGTTTCTAACGGTAG TGACTTTAGGGATCTACAGCTTTTGGGCAAGGACCAACATCCAAAAGTTTATGGCAGAGAATTTGGAATGGGCTGGTGAA CGTTTTTCCTTTCATGGAACTGGAAAAGAAAGATTCATCGGGTTTTTAAAAGCCGCAGGAATTTTCGTCGTACTTTACAT CGCGATCATGATCATACTTTGGATCGCAAACAAAATTCCCGTCCCTTACTTCGCTACAATCATCGGGATCGTATTGTATT TGGGAGTGGTGTTGGCACTTGTTCCTATCATCATCGTTGGTGGTAGAAAGTACATCACTTCCCGCACTGGGTATCGGAAT CTTCGATTTGGATTTGATGGTAAAATCATAGAAGTTGCAAAAATTTATGGAAAAGGGATTCTCCTCACTATCGTTACACT TGGAATCTATTATCCATGGTTTTTTGCAGAAAAAGAAGCGTACATCCAAAGCAAAACTCGTTATGGAAATACAAATTTTG GTTTTTCTGCAGATGGTAAGGAAATTTTCTTTTTATACTTAAAAGGAATCCTTCTTAGCATCGTGACAGTCGGAATTTAT TATTCTTGGTTTTTGGCTGACGTCCAAAACTACATTTGGAATCGCACTAGTTTCCAAGGCAAAAAATTTAGATCTGATCT CACTGGCGGAAAGATTTTTGTGAATTTTCTGATCGCTTATTTGATCATTCTATTCACACTCGGTATTGGATTTGCTTGGG CTGTGGTTCGATTGACAAAATTGTTCATCGAATCTGTGAGTTTAGAAGCAGAAGTTGACTTCTCAACGATTTCTGCCCAA CCAGATGCAACTGCAAATGCTACCGCGGAAGGATTGGAAGCACTTGCGGAAACTTTAGAAGCCTTCCTATCTTAA
Upstream 100 bases:
>100_bases TGTACGCATTCTACACATGTAGACGTAAGGAACAAAGCTCATGTTCTATGATTTTTTAAAAAATAGTGAATTGTGTTCAA CCGTATAAAATGTATTTCTA
Downstream 100 bases:
>100_bases ACATTGTTTCAAAACCAAACATTTACATCACGATATTTTAATGGTGTCTCGGCGGTCCCTGAAGAGGGGACCGTTCTTGT CCATGGCCAAACTGTCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVWKYFSLPNSKIVDTLDTNYPLGKSMSNTRLQYHATGGQLFMLFLKNMFLTVVTLGIYSFWARTNIQKFMAENLEWAGE RFSFHGTGKERFIGFLKAAGIFVVLYIAIMIILWIANKIPVPYFATIIGIVLYLGVVLALVPIIIVGGRKYITSRTGYRN LRFGFDGKIIEVAKIYGKGILLTIVTLGIYYPWFFAEKEAYIQSKTRYGNTNFGFSADGKEIFFLYLKGILLSIVTVGIY YSWFLADVQNYIWNRTSFQGKKFRSDLTGGKIFVNFLIAYLIILFTLGIGFAWAVVRLTKLFIESVSLEAEVDFSTISAQ PDATANATAEGLEALAETLEAFLS
Sequences:
>Translated_344_residues MVWKYFSLPNSKIVDTLDTNYPLGKSMSNTRLQYHATGGQLFMLFLKNMFLTVVTLGIYSFWARTNIQKFMAENLEWAGE RFSFHGTGKERFIGFLKAAGIFVVLYIAIMIILWIANKIPVPYFATIIGIVLYLGVVLALVPIIIVGGRKYITSRTGYRN LRFGFDGKIIEVAKIYGKGILLTIVTLGIYYPWFFAEKEAYIQSKTRYGNTNFGFSADGKEIFFLYLKGILLSIVTVGIY YSWFLADVQNYIWNRTSFQGKKFRSDLTGGKIFVNFLIAYLIILFTLGIGFAWAVVRLTKLFIESVSLEAEVDFSTISAQ PDATANATAEGLEALAETLEAFLS >Mature_344_residues MVWKYFSLPNSKIVDTLDTNYPLGKSMSNTRLQYHATGGQLFMLFLKNMFLTVVTLGIYSFWARTNIQKFMAENLEWAGE RFSFHGTGKERFIGFLKAAGIFVVLYIAIMIILWIANKIPVPYFATIIGIVLYLGVVLALVPIIIVGGRKYITSRTGYRN LRFGFDGKIIEVAKIYGKGILLTIVTLGIYYPWFFAEKEAYIQSKTRYGNTNFGFSADGKEIFFLYLKGILLSIVTVGIY YSWFLADVQNYIWNRTSFQGKKFRSDLTGGKIFVNFLIAYLIILFTLGIGFAWAVVRLTKLFIESVSLEAEVDFSTISAQ PDATANATAEGLEALAETLEAFLS
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38847; Mature: 38847
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWKYFSLPNSKIVDTLDTNYPLGKSMSNTRLQYHATGGQLFMLFLKNMFLTVVTLGIYS CCEEEECCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH FWARTNIQKFMAENLEWAGERFSFHGTGKERFIGFLKAAGIFVVLYIAIMIILWIANKIP HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPYFATIIGIVLYLGVVLALVPIIIVGGRKYITSRTGYRNLRFGFDGKIIEVAKIYGKGI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCEEECCCCCHHHHHHHHCCHH LLTIVTLGIYYPWFFAEKEAYIQSKTRYGNTNFGFSADGKEIFFLYLKGILLSIVTVGIY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YSWFLADVQNYIWNRTSFQGKKFRSDLTGGKIFVNFLIAYLIILFTLGIGFAWAVVRLTK HHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFIESVSLEAEVDFSTISAQPDATANATAEGLEALAETLEAFLS HHHHHHCCCEEECHHEECCCCCCCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MVWKYFSLPNSKIVDTLDTNYPLGKSMSNTRLQYHATGGQLFMLFLKNMFLTVVTLGIYS CCEEEECCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH FWARTNIQKFMAENLEWAGERFSFHGTGKERFIGFLKAAGIFVVLYIAIMIILWIANKIP HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPYFATIIGIVLYLGVVLALVPIIIVGGRKYITSRTGYRNLRFGFDGKIIEVAKIYGKGI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCEEECCCCCHHHHHHHHCCHH LLTIVTLGIYYPWFFAEKEAYIQSKTRYGNTNFGFSADGKEIFFLYLKGILLSIVTVGIY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YSWFLADVQNYIWNRTSFQGKKFRSDLTGGKIFVNFLIAYLIILFTLGIGFAWAVVRLTK HHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFIESVSLEAEVDFSTISAQPDATANATAEGLEALAETLEAFLS HHHHHHCCCEEECHHEECCCCCCCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA