Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222594
Identifier: 183222594
GI number: 183222594
Start: 3363986
End: 3364594
Strand: Direct
Name: 183222594
Synonym: LEPBI_I3249
Alternate gene names: NA
Gene position: 3363986-3364594 (Clockwise)
Preceding gene: 183222590
Following gene: 183222597
Centisome position: 93.45
GC content: 42.86
Gene sequence:
>609_bases TTGGCAGCCCTTCTGACTTCACCACCTGTGATTTCATCTGTGACCCCTCAAATCGGCACACCGACTCAAAACAATTCCAA TGCATTTTATACCGCGACAGAAGTGATCATCAAAGGTGAAAATTTTGGCCTCGAACCCGTGGTTCGGTTCAATGACACAG TAGCGACGCTCTCTTTGAATTTAGGCACTGAACTTTATACGAAAGTTCCTGATGGAACATATTCTGGTTACATCACCGTT TCGAAATCAGGTGGTTCCTGTTTACCGAATTCCAAAACGGGTGTGAATTGTTCCGGAATGGAATTTTTCGTCGATTGTTA CTCAGTGACAAACAAACAGTATGGACCCGAAATCGAACTCAAACAAGGCCAAGGAATATCCGTAGAATATGATGGGAATG AAACCAAGGCATTTCGAACCGATACTCTATTGTCTGAACGTAACTTGACGATTAGTTGCGAAAGTGTTGTCACAGTCCGT GTGTTTAGCCGTTCTTGCCAAGCGACAGATTACGTTTTACAAAACAATCCAATCATTCCATTTCCATCAGGAGTTGCCAC GCAGTTTTATATCACCGCAGAATCAGCGACTTGTAGTTTAGTTCTCTAA
Upstream 100 bases:
>100_bases AATGGAAAAAGCAGTCATGAGAAGGATTTTATACACAATCGGATTCTCACTAGTGTTTGGAAACAGTTTTTCCTGCATTA AATCGTCATCAGAAGACCCC
Downstream 100 bases:
>100_bases AACGATTTATTTTTAACGAATCGTTTGAATACAATGAGATTGGCTGCTCCCATCCACTCATTCATATACTCGCGAAATAT GGTTTCTCTCGGTTTAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MAALLTSPPVISSVTPQIGTPTQNNSNAFYTATEVIIKGENFGLEPVVRFNDTVATLSLNLGTELYTKVPDGTYSGYITV SKSGGSCLPNSKTGVNCSGMEFFVDCYSVTNKQYGPEIELKQGQGISVEYDGNETKAFRTDTLLSERNLTISCESVVTVR VFSRSCQATDYVLQNNPIIPFPSGVATQFYITAESATCSLVL
Sequences:
>Translated_202_residues MAALLTSPPVISSVTPQIGTPTQNNSNAFYTATEVIIKGENFGLEPVVRFNDTVATLSLNLGTELYTKVPDGTYSGYITV SKSGGSCLPNSKTGVNCSGMEFFVDCYSVTNKQYGPEIELKQGQGISVEYDGNETKAFRTDTLLSERNLTISCESVVTVR VFSRSCQATDYVLQNNPIIPFPSGVATQFYITAESATCSLVL >Mature_201_residues AALLTSPPVISSVTPQIGTPTQNNSNAFYTATEVIIKGENFGLEPVVRFNDTVATLSLNLGTELYTKVPDGTYSGYITVS KSGGSCLPNSKTGVNCSGMEFFVDCYSVTNKQYGPEIELKQGQGISVEYDGNETKAFRTDTLLSERNLTISCESVVTVRV FSRSCQATDYVLQNNPIIPFPSGVATQFYITAESATCSLVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21734; Mature: 21602
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALLTSPPVISSVTPQIGTPTQNNSNAFYTATEVIIKGENFGLEPVVRFNDTVATLSLN CCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCEEEEEEEE LGTELYTKVPDGTYSGYITVSKSGGSCLPNSKTGVNCSGMEFFVDCYSVTNKQYGPEIEL CCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCEEEE KQGQGISVEYDGNETKAFRTDTLLSERNLTISCESVVTVRVFSRSCQATDYVLQNNPIIP ECCCCEEEEECCCCCEEEEECCEECCCCCEEEECCEEEEEEECCCCCCEEEEEECCCEEE FPSGVATQFYITAESATCSLVL CCCCCEEEEEEEECCCEEEEEC >Mature Secondary Structure AALLTSPPVISSVTPQIGTPTQNNSNAFYTATEVIIKGENFGLEPVVRFNDTVATLSLN CCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCEEEEEEEE LGTELYTKVPDGTYSGYITVSKSGGSCLPNSKTGVNCSGMEFFVDCYSVTNKQYGPEIEL CCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCEEEE KQGQGISVEYDGNETKAFRTDTLLSERNLTISCESVVTVRVFSRSCQATDYVLQNNPIIP ECCCCEEEEECCCCCEEEEECCEECCCCCEEEECCEEEEEEECCCCCCEEEEEECCCEEE FPSGVATQFYITAESATCSLVL CCCCCEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA