Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222590
Identifier: 183222590
GI number: 183222590
Start: 3361940
End: 3362464
Strand: Direct
Name: 183222590
Synonym: LEPBI_I3245
Alternate gene names: NA
Gene position: 3361940-3362464 (Clockwise)
Preceding gene: 183222588
Following gene: 183222594
Centisome position: 93.4
GC content: 38.1
Gene sequence:
>525_bases ATGAATTTAAGAATTGTATTAAGTGTTTGGGCAGTCGTACTACTTTCTAGTACTACTTTACTCGCGCAAGATGCCAATGT GGCTTTAGGAAGATACCTTCCACCTGAAAAAGATTCGGTCATCGAAATTTTCAAGTGTGGTGATAAATACTGTGGAAAAA CAGTTTGTATCAAGGACAACGCTTACCCAGAAAAAGAGAAAGACAAAGGGATTCCTGGAACACCTTATTTAGATCACAAT AACGAGGATCCTAAGTTAAGAACCCGTCCCAATTTAGGAATGGTCTTTATCACTGGATTTGATTATGCGGGAGAAGGTGT TTATAAAAACGGCCGTATTTACAATCCGCGTGATGGAAAAACATACTGTGGAAAATTCACAGCTCTTGACGGTGGCAATC GATTGGACCTTAAAGGAACTCTTTGTTCCATCACATTCATCGGAAAAACAAACAATTGGGTGAAATTAGGTTCTATGAAC CTGGACGATCCTAAATGGGATTGTACGTTTAAAACTAAAAAATAA
Upstream 100 bases:
>100_bases TTTTCTTACTTCGAATGGTTGAAATTTGAAAAAACCAGCTTGCCATAGATAGGAAAATCTGACAAAATAAGCGAATCCAT TTTTTAGAATAAGGATCTGT
Downstream 100 bases:
>100_bases TTGAAATGATCAAACACCTGCCGACCAAACTGGCTGGCAGGTAACTTTTGTTATAAGAAGTAAAAATTACTTTTTTTCAA AGTCTTTATAGAGTAAGGAA
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNLRIVLSVWAVVLLSSTTLLAQDANVALGRYLPPEKDSVIEIFKCGDKYCGKTVCIKDNAYPEKEKDKGIPGTPYLDHN NEDPKLRTRPNLGMVFITGFDYAGEGVYKNGRIYNPRDGKTYCGKFTALDGGNRLDLKGTLCSITFIGKTNNWVKLGSMN LDDPKWDCTFKTKK
Sequences:
>Translated_174_residues MNLRIVLSVWAVVLLSSTTLLAQDANVALGRYLPPEKDSVIEIFKCGDKYCGKTVCIKDNAYPEKEKDKGIPGTPYLDHN NEDPKLRTRPNLGMVFITGFDYAGEGVYKNGRIYNPRDGKTYCGKFTALDGGNRLDLKGTLCSITFIGKTNNWVKLGSMN LDDPKWDCTFKTKK >Mature_174_residues MNLRIVLSVWAVVLLSSTTLLAQDANVALGRYLPPEKDSVIEIFKCGDKYCGKTVCIKDNAYPEKEKDKGIPGTPYLDHN NEDPKLRTRPNLGMVFITGFDYAGEGVYKNGRIYNPRDGKTYCGKFTALDGGNRLDLKGTLCSITFIGKTNNWVKLGSMN LDDPKWDCTFKTKK
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19439; Mature: 19439
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRIVLSVWAVVLLSSTTLLAQDANVALGRYLPPEKDSVIEIFKCGDKYCGKTVCIKDN CCEEEEHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECC AYPEKEKDKGIPGTPYLDHNNEDPKLRTRPNLGMVFITGFDYAGEGVYKNGRIYNPRDGK CCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCEECCCCEECCCCCC TYCGKFTALDGGNRLDLKGTLCSITFIGKTNNWVKLGSMNLDDPKWDCTFKTKK EEEEEEEEECCCCEEEECEEEEEEEEEECCCCEEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure MNLRIVLSVWAVVLLSSTTLLAQDANVALGRYLPPEKDSVIEIFKCGDKYCGKTVCIKDN CCEEEEHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECC AYPEKEKDKGIPGTPYLDHNNEDPKLRTRPNLGMVFITGFDYAGEGVYKNGRIYNPRDGK CCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCEECCCCEECCCCCC TYCGKFTALDGGNRLDLKGTLCSITFIGKTNNWVKLGSMNLDDPKWDCTFKTKK EEEEEEEEECCCCEEEECEEEEEEEEEECCCCEEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA