| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222431
Identifier: 183222431
GI number: 183222431
Start: 3194352
End: 3195314
Strand: Reverse
Name: 183222431
Synonym: LEPBI_I3085
Alternate gene names: NA
Gene position: 3195314-3194352 (Counterclockwise)
Preceding gene: 183222432
Following gene: 183222430
Centisome position: 88.77
GC content: 39.15
Gene sequence:
>963_bases ATGTATCAGAAGATGGAATCAGCTGGAAAAAAAAAGAAGTCTATCGTTCGTAATGCGATGCGTCCTTTTATTTTTTTCGA AGATGGAACTTACTACCTATATTATGAAAGGTATAAATTTTTACATGTACTTATGTCTTGGTTTCCTTATCGCAAGTGGA AATCACATATAGAAGTCAAAACAAGTAAAGATCTTGTCCATTGGTCGGCGCCAAAAACTGTCATTGTACCCAAGTTTCCT TTTCACAAAGATCCAAACTTTGGAGAATCGGTGAGTAATCCTTGCCTCTTGAAATTTGGAGACAAGTACCGAATGTACTT TTCTTCGTCTCTTGTGATGATTCCTGACTGTGGTTTTTGTGAACCCAAATACATTACGGTTGCGGAATCAAGTTCTCCCC TCGGTCCTTTTTCTTATTTTTCAGAGCCCATCCTTTCTCCAAGTGATATGGATCCTTTTTGTAATTTGGGAGCCGGTTCC ATCAAAGTGATCCCTTGGAAGGGAAGGTATTTAGGATTTCAAAATGGCATTTTTTGGAATCCAGTCAGGAAAGAATCTTG TTCGGCCATTTTATTTTTACAAAGCGAAGATGGGATCCATTTTGATCGCATCAACCAAACCCCCATCCTTGGTCCTACTG GCAAAGGTTGGAAGGCAAGCCATGTGTATGCTTGTGATGTGAAGTATTCGGAAGCAGAGAATATTTTTATTATGTACTTC AATGCCCGTGACAAAGCGCACTGGACAAAGGGCAAAGAAGCCATCGGGCTTTTTGTGGGAAAGGTAGAGGAATCAAAGGG AAATACGAAATTAGAATCGAAACAAAAGTCCAAATCCAAATCGAAGTTAGCTTCTCAATCGAATCGGAATTCGAGTGCCA AGTCTCAAACAAAAACCAAATCGAAGCCATCTGCCAAAAAGAAACTAACAAATCCAAAACAAAAGAAGTCTAAATCCAAA TGA
Upstream 100 bases:
>100_bases CCTTCACCTATCTTGGCAGATCCCAGTTTTTTATTCCCAGAGTCTTGTCCAGATGGACTCTGGCATCTTTTTGCTCATAA CATCTTCGGTGTGTTAGAGT
Downstream 100 bases:
>100_bases CAAAATCACTGATCGGACATTCCAAGGACTTAGGAGACAATTTCATCATCCGGCGCGTATTACCAGCGTTAGAGAAACGT TCAGTGGGGCCCTTTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MYQKMESAGKKKKSIVRNAMRPFIFFEDGTYYLYYERYKFLHVLMSWFPYRKWKSHIEVKTSKDLVHWSAPKTVIVPKFP FHKDPNFGESVSNPCLLKFGDKYRMYFSSSLVMIPDCGFCEPKYITVAESSSPLGPFSYFSEPILSPSDMDPFCNLGAGS IKVIPWKGRYLGFQNGIFWNPVRKESCSAILFLQSEDGIHFDRINQTPILGPTGKGWKASHVYACDVKYSEAENIFIMYF NARDKAHWTKGKEAIGLFVGKVEESKGNTKLESKQKSKSKSKLASQSNRNSSAKSQTKTKSKPSAKKKLTNPKQKKSKSK
Sequences:
>Translated_320_residues MYQKMESAGKKKKSIVRNAMRPFIFFEDGTYYLYYERYKFLHVLMSWFPYRKWKSHIEVKTSKDLVHWSAPKTVIVPKFP FHKDPNFGESVSNPCLLKFGDKYRMYFSSSLVMIPDCGFCEPKYITVAESSSPLGPFSYFSEPILSPSDMDPFCNLGAGS IKVIPWKGRYLGFQNGIFWNPVRKESCSAILFLQSEDGIHFDRINQTPILGPTGKGWKASHVYACDVKYSEAENIFIMYF NARDKAHWTKGKEAIGLFVGKVEESKGNTKLESKQKSKSKSKLASQSNRNSSAKSQTKTKSKPSAKKKLTNPKQKKSKSK >Mature_320_residues MYQKMESAGKKKKSIVRNAMRPFIFFEDGTYYLYYERYKFLHVLMSWFPYRKWKSHIEVKTSKDLVHWSAPKTVIVPKFP FHKDPNFGESVSNPCLLKFGDKYRMYFSSSLVMIPDCGFCEPKYITVAESSSPLGPFSYFSEPILSPSDMDPFCNLGAGS IKVIPWKGRYLGFQNGIFWNPVRKESCSAILFLQSEDGIHFDRINQTPILGPTGKGWKASHVYACDVKYSEAENIFIMYF NARDKAHWTKGKEAIGLFVGKVEESKGNTKLESKQKSKSKSKLASQSNRNSSAKSQTKTKSKPSAKKKLTNPKQKKSKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36620; Mature: 36620
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQKMESAGKKKKSIVRNAMRPFIFFEDGTYYLYYERYKFLHVLMSWFPYRKWKSHIEVK CCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHHHHCCHHHHHEEEEE TSKDLVHWSAPKTVIVPKFPFHKDPNFGESVSNPCLLKFGDKYRMYFSSSLVMIPDCGFC ECCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEECCCCCC EPKYITVAESSSPLGPFSYFSEPILSPSDMDPFCNLGAGSIKVIPWKGRYLGFQNGIFWN CCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCEEECCCCEEEC PVRKESCSAILFLQSEDGIHFDRINQTPILGPTGKGWKASHVYACDVKYSEAENIFIMYF CCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEE NARDKAHWTKGKEAIGLFVGKVEESKGNTKLESKQKSKSKSKLASQSNRNSSAKSQTKTK ECCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC SKPSAKKKLTNPKQKKSKSK CCCCHHHHCCCCHHHHCCCC >Mature Secondary Structure MYQKMESAGKKKKSIVRNAMRPFIFFEDGTYYLYYERYKFLHVLMSWFPYRKWKSHIEVK CCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHHHHCCHHHHHEEEEE TSKDLVHWSAPKTVIVPKFPFHKDPNFGESVSNPCLLKFGDKYRMYFSSSLVMIPDCGFC ECCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEECCCCCC EPKYITVAESSSPLGPFSYFSEPILSPSDMDPFCNLGAGSIKVIPWKGRYLGFQNGIFWN CCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCEEECCCCEEEC PVRKESCSAILFLQSEDGIHFDRINQTPILGPTGKGWKASHVYACDVKYSEAENIFIMYF CCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEE NARDKAHWTKGKEAIGLFVGKVEESKGNTKLESKQKSKSKSKLASQSNRNSSAKSQTKTK ECCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC SKPSAKKKLTNPKQKKSKSK CCCCHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA