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The map label for this gene is yhhW [C]

Identifier: 183222430

GI number: 183222430

Start: 3193495

End: 3194355

Strand: Reverse

Name: yhhW [C]

Synonym: LEPBI_I3084

Alternate gene names: 183222430

Gene position: 3194355-3193495 (Counterclockwise)

Preceding gene: 183222431

Following gene: 183222426

Centisome position: 88.74

GC content: 43.79

Gene sequence:

>861_bases
ATGACAAAATCACTGATCGGACATTCCAAGGACTTAGGAGACAATTTCATCATCCGGCGCGTATTACCAGCGTTAGAGAA
ACGTTCAGTGGGGCCCTTTGTTTTTTTTGATCATTTTGGTCCAGTACCTGTGGTGACTGGTGAGGAACTGGTTGTCCGAG
CACACCCGCATATCGGCCTTGCGACCATTACGTTTTTATACGATGGAGTGATCACACATAGGGATAGTTTGGCAGTGGAG
ATGGACATTCGCCCCAATGAAACCAATTGGATGGTGGCAGGGAATGGCATCGTTCACAGTGAACGGTCCAAGTTTGACCC
CAAATACGAAGTGTTAGAGGGCATCCAAACCTGGATTGCCTTACCAAAAGAAAAAGAGGCGATCAATCCTAGTTTCCAAC
ATTTGTCTGAATCTGAAATACCCCTTTGGAAAGGAAACGGTATCACGTTTCGTTTGTTAGGTGGAAAGTTTTTGGGTTTA
GAATCAAAGGCTGTGGTCCACTCTCCTCTTTTTTATGCAGACATTGATTTGAAAATGGAATCTGATCCTATCGAATGGAA
TCTCTCTTCGGAAGAAGAAGCAGGTCTCTACATCGCAAGGGGTGCCATTGAATCGGAAGGTCAGTCTTATGCGATGGGAT
CGATGGTTCTTTTTGAAAAAGGAACAAAGGTAAGTTTTAAAGCCAAACAAAACAGCCGTTTGATGTTACTTGGTGGGGAA
CCACTCAAAGAAAAACGTCATTTGTATTGGAACTTTGTTGCAACAGACCAATCCACAATTGAAGAGGCAAAAGAGAGATG
GGCAAAGGATGAATTTCCAAAAGTACCTGGGGAAACCGATCGAATCCCATTGCCAAGTTAA

Upstream 100 bases:

>100_bases
CGAATCGGAATTCGAGTGCCAAGTCTCAAACAAAAACCAAATCGAAGCCATCTGCCAAAAAGAAACTAACAAATCCAAAA
CAAAAGAAGTCTAAATCCAA

Downstream 100 bases:

>100_bases
TCTCATTTATAATATAGAAGGAAAATTTTGATTGGATTCGTTCTGAATCCATTGTCCTTAGTTCGAATCAGACAGTCTGC
CCAAGTTTTTTTTCCTTAAT

Product: putative pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTKSLIGHSKDLGDNFIIRRVLPALEKRSVGPFVFFDHFGPVPVVTGEELVVRAHPHIGLATITFLYDGVITHRDSLAVE
MDIRPNETNWMVAGNGIVHSERSKFDPKYEVLEGIQTWIALPKEKEAINPSFQHLSESEIPLWKGNGITFRLLGGKFLGL
ESKAVVHSPLFYADIDLKMESDPIEWNLSSEEEAGLYIARGAIESEGQSYAMGSMVLFEKGTKVSFKAKQNSRLMLLGGE
PLKEKRHLYWNFVATDQSTIEEAKERWAKDEFPKVPGETDRIPLPS

Sequences:

>Translated_286_residues
MTKSLIGHSKDLGDNFIIRRVLPALEKRSVGPFVFFDHFGPVPVVTGEELVVRAHPHIGLATITFLYDGVITHRDSLAVE
MDIRPNETNWMVAGNGIVHSERSKFDPKYEVLEGIQTWIALPKEKEAINPSFQHLSESEIPLWKGNGITFRLLGGKFLGL
ESKAVVHSPLFYADIDLKMESDPIEWNLSSEEEAGLYIARGAIESEGQSYAMGSMVLFEKGTKVSFKAKQNSRLMLLGGE
PLKEKRHLYWNFVATDQSTIEEAKERWAKDEFPKVPGETDRIPLPS
>Mature_285_residues
TKSLIGHSKDLGDNFIIRRVLPALEKRSVGPFVFFDHFGPVPVVTGEELVVRAHPHIGLATITFLYDGVITHRDSLAVEM
DIRPNETNWMVAGNGIVHSERSKFDPKYEVLEGIQTWIALPKEKEAINPSFQHLSESEIPLWKGNGITFRLLGGKFLGLE
SKAVVHSPLFYADIDLKMESDPIEWNLSSEEEAGLYIARGAIESEGQSYAMGSMVLFEKGTKVSFKAKQNSRLMLLGGEP
LKEKRHLYWNFVATDQSTIEEAKERWAKDEFPKVPGETDRIPLPS

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=285, Percent_Identity=27.719298245614, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI4505823, Length=285, Percent_Identity=27.719298245614, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 32150; Mature: 32019

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSLIGHSKDLGDNFIIRRVLPALEKRSVGPFVFFDHFGPVPVVTGEELVVRAHPHIGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCEEEEEECCCCCH
ATITFLYDGVITHRDSLAVEMDIRPNETNWMVAGNGIVHSERSKFDPKYEVLEGIQTWIA
HHHHHHHHHHEEECCCEEEEEECCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHC
LPKEKEAINPSFQHLSESEIPLWKGNGITFRLLGGKFLGLESKAVVHSPLFYADIDLKME
CCCCHHHCCCHHHHCCCCCCCEEECCCEEEEEECCEEECCCCCCEEECCEEEEEEEEEEC
SDPIEWNLSSEEEAGLYIARGAIESEGQSYAMGSMVLFEKGTKVSFKAKQNSRLMLLGGE
CCCEEEECCCCCCCCEEEEECCCCCCCCCEEECEEEEEECCCEEEEEECCCCEEEEECCC
PLKEKRHLYWNFVATDQSTIEEAKERWAKDEFPKVPGETDRIPLPS
CCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKSLIGHSKDLGDNFIIRRVLPALEKRSVGPFVFFDHFGPVPVVTGEELVVRAHPHIGL
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCEEEEEECCCCCH
ATITFLYDGVITHRDSLAVEMDIRPNETNWMVAGNGIVHSERSKFDPKYEVLEGIQTWIA
HHHHHHHHHHEEECCCEEEEEECCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHC
LPKEKEAINPSFQHLSESEIPLWKGNGITFRLLGGKFLGLESKAVVHSPLFYADIDLKME
CCCCHHHCCCHHHHCCCCCCCEEECCCEEEEEECCEEECCCCCCEEECCEEEEEEEEEEC
SDPIEWNLSSEEEAGLYIARGAIESEGQSYAMGSMVLFEKGTKVSFKAKQNSRLMLLGGE
CCCEEEECCCCCCCCEEEEECCCCCCCCCEEECEEEEEECCCEEEEEECCCCEEEEECCC
PLKEKRHLYWNFVATDQSTIEEAKERWAKDEFPKVPGETDRIPLPS
CCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]