| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222350
Identifier: 183222350
GI number: 183222350
Start: 3109662
End: 3111185
Strand: Reverse
Name: 183222350
Synonym: LEPBI_I3003
Alternate gene names: NA
Gene position: 3111185-3109662 (Counterclockwise)
Preceding gene: 183222351
Following gene: 183222348
Centisome position: 86.43
GC content: 31.5
Gene sequence:
>1524_bases TTGGGATGGAGTTATTATCATGGAATCTTGATCCATCTATTATTCGGGGCCTGTATTTTTTTTGAATCGATCTATGTTCG AATTCAAAAATTAAATTCGCTTTTAGGAAATCACATTCGAACATTTTTGTTTTTACTCTTATTCGTTGCTTTAAATTACC AATGGGTTTACCAAACACAAATTCAGTTTTCCTTATTGGGTTATCTTATCGTTAATTTTGGCCAAATTGTACATGAGTGG ATCCCTTTTATAAAAGAGTGGAATTTAATTCAATTTTTCCCTATTTTAATTTATTTTCTTTTGTTAGATCCTTTTTTAAC ATTTTCTCGGCACCGTGTGGAACCCATATTTTTGATGTTAGTGATTTATTTACTTTTGATCATGAATGCAAAGGTAGGTG ATCAAAAAAAACAAATTCACTTCACTCCAAAACAATCGAATCAAAAAATAAATCGTTATTTGGATCAAATTCCGCAAGGA ACGAACATTGTTTTGGTAGTTTTGGAAGGTGTTGCAAGAAAACATATCTTGGAGATGAAGTCTGAATATATAAACTATTC TTTGTTAAACGGATCACATTTTTGGATTCCTATGCCACATACTTCCAAAAGTTTATACACATGGATGACTGGTCATTCAC AGTTGTTTAGTACACGAATTGAACCAGACTCAATCAATGAAGAAGAAAGTTTGCCAATTATACTAAAAAAAAGATTTTTT TACCAGACTCAAATGATTTATACTCAATCAATTTATTTTGAAGGTATGAATGCATTTTTTCCAAAAATTTTCGATAAGGT GACTGATAAAACGATTCTGGAAACCAAATACAATGACAAATGGGAGTCCTTTAGTTGGGGAATGGACGATCGGGTGATCC TTTCTGAATTCAAACAACAAATGGATCGATCCAAACCTTTTTTTGTTTTCATTGGCATGAGCCAAACCCATAGTCCTTAC TTTACCAATTCGATATCAGGATCTTCTTTAAACAAACTCCAACGTCACAAAAAAGCTTTAGAAGAAAATGTAACGTTAAT TGATGACTTGATATCATTTATTAAATCGAGTTCGGATCAGGAGACTTTATTGATTGTTACTGCTGATCATGGGGAAAGTT TTGGTGAAGAAGGCGCCAACGCTCATAACTATTCTCTTTACAACCAAGAAGTAGATGTACCGTTTTTACTTTATTTGATT CAATCTAACAAATTATATATCCCACTTGTGGGATCTTCGATTCATTTTAAGGAAACATTACTTCAATTAATGGAAAATAA AATGGAAAATAAAGAAATGAGCCATCATTTTTTAAAATCCAGTTACCAACCAACCATACCATTCAAAACTTGGAATTCGG AAATCCAAAGAGGAATTGTGAAACGGGAAAAAAAATATATCTATCACAATGACAAAAACATTTTATTTGAAATGGATTGG AATGATTTTGATAGAAAAATCATCAATGATCCAATTTTAAAGGAAAAAATTCTAAAGGAGATTTATGCGGAGACTTCTAA ATAG
Upstream 100 bases:
>100_bases GTTAAGTAAATTAAACGATTTTTTTCTAACTTCTCGTAGCAAGTGGTTTGTTTTTTATGGGATTTTATATCTATTCCATT TTCCTGGTGATTGGAATTGG
Downstream 100 bases:
>100_bases TTTGGGTTTGGGGACTAGAATGTCCTTTTAACAAATTTAAAATCGAAATTTCCAGAAATTTTTTATAATCCAATACAAAC ATTTCGAGTTCTGTATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MGWSYYHGILIHLLFGACIFFESIYVRIQKLNSLLGNHIRTFLFLLLFVALNYQWVYQTQIQFSLLGYLIVNFGQIVHEW IPFIKEWNLIQFFPILIYFLLLDPFLTFSRHRVEPIFLMLVIYLLLIMNAKVGDQKKQIHFTPKQSNQKINRYLDQIPQG TNIVLVVLEGVARKHILEMKSEYINYSLLNGSHFWIPMPHTSKSLYTWMTGHSQLFSTRIEPDSINEEESLPIILKKRFF YQTQMIYTQSIYFEGMNAFFPKIFDKVTDKTILETKYNDKWESFSWGMDDRVILSEFKQQMDRSKPFFVFIGMSQTHSPY FTNSISGSSLNKLQRHKKALEENVTLIDDLISFIKSSSDQETLLIVTADHGESFGEEGANAHNYSLYNQEVDVPFLLYLI QSNKLYIPLVGSSIHFKETLLQLMENKMENKEMSHHFLKSSYQPTIPFKTWNSEIQRGIVKREKKYIYHNDKNILFEMDW NDFDRKIINDPILKEKILKEIYAETSK
Sequences:
>Translated_507_residues MGWSYYHGILIHLLFGACIFFESIYVRIQKLNSLLGNHIRTFLFLLLFVALNYQWVYQTQIQFSLLGYLIVNFGQIVHEW IPFIKEWNLIQFFPILIYFLLLDPFLTFSRHRVEPIFLMLVIYLLLIMNAKVGDQKKQIHFTPKQSNQKINRYLDQIPQG TNIVLVVLEGVARKHILEMKSEYINYSLLNGSHFWIPMPHTSKSLYTWMTGHSQLFSTRIEPDSINEEESLPIILKKRFF YQTQMIYTQSIYFEGMNAFFPKIFDKVTDKTILETKYNDKWESFSWGMDDRVILSEFKQQMDRSKPFFVFIGMSQTHSPY FTNSISGSSLNKLQRHKKALEENVTLIDDLISFIKSSSDQETLLIVTADHGESFGEEGANAHNYSLYNQEVDVPFLLYLI QSNKLYIPLVGSSIHFKETLLQLMENKMENKEMSHHFLKSSYQPTIPFKTWNSEIQRGIVKREKKYIYHNDKNILFEMDW NDFDRKIINDPILKEKILKEIYAETSK >Mature_506_residues GWSYYHGILIHLLFGACIFFESIYVRIQKLNSLLGNHIRTFLFLLLFVALNYQWVYQTQIQFSLLGYLIVNFGQIVHEWI PFIKEWNLIQFFPILIYFLLLDPFLTFSRHRVEPIFLMLVIYLLLIMNAKVGDQKKQIHFTPKQSNQKINRYLDQIPQGT NIVLVVLEGVARKHILEMKSEYINYSLLNGSHFWIPMPHTSKSLYTWMTGHSQLFSTRIEPDSINEEESLPIILKKRFFY QTQMIYTQSIYFEGMNAFFPKIFDKVTDKTILETKYNDKWESFSWGMDDRVILSEFKQQMDRSKPFFVFIGMSQTHSPYF TNSISGSSLNKLQRHKKALEENVTLIDDLISFIKSSSDQETLLIVTADHGESFGEEGANAHNYSLYNQEVDVPFLLYLIQ SNKLYIPLVGSSIHFKETLLQLMENKMENKEMSHHFLKSSYQPTIPFKTWNSEIQRGIVKREKKYIYHNDKNILFEMDWN DFDRKIINDPILKEKILKEIYAETSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60062; Mature: 59931
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWSYYHGILIHLLFGACIFFESIYVRIQKLNSLLGNHIRTFLFLLLFVALNYQWVYQTQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH IQFSLLGYLIVNFGQIVHEWIPFIKEWNLIQFFPILIYFLLLDPFLTFSRHRVEPIFLML HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VIYLLLIMNAKVGDQKKQIHFTPKQSNQKINRYLDQIPQGTNIVLVVLEGVARKHILEMK HHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH SEYINYSLLNGSHFWIPMPHTSKSLYTWMTGHSQLFSTRIEPDSINEEESLPIILKKRFF HHHCCEEEECCCEEEEECCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHH YQTQMIYTQSIYFEGMNAFFPKIFDKVTDKTILETKYNDKWESFSWGMDDRVILSEFKQQ HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH MDRSKPFFVFIGMSQTHSPYFTNSISGSSLNKLQRHKKALEENVTLIDDLISFIKSSSDQ HHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC ETLLIVTADHGESFGEEGANAHNYSLYNQEVDVPFLLYLIQSNKLYIPLVGSSIHFKETL CEEEEEECCCCCCCHHCCCCCCCCEEECCCCCCHHEEEEEECCCEEEEEECCCCHHHHHH LQLMENKMENKEMSHHFLKSSYQPTIPFKTWNSEIQRGIVKREKKYIYHNDKNILFEMDW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEECC NDFDRKIINDPILKEKILKEIYAETSK CHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure GWSYYHGILIHLLFGACIFFESIYVRIQKLNSLLGNHIRTFLFLLLFVALNYQWVYQTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH IQFSLLGYLIVNFGQIVHEWIPFIKEWNLIQFFPILIYFLLLDPFLTFSRHRVEPIFLML HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VIYLLLIMNAKVGDQKKQIHFTPKQSNQKINRYLDQIPQGTNIVLVVLEGVARKHILEMK HHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH SEYINYSLLNGSHFWIPMPHTSKSLYTWMTGHSQLFSTRIEPDSINEEESLPIILKKRFF HHHCCEEEECCCEEEEECCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHH YQTQMIYTQSIYFEGMNAFFPKIFDKVTDKTILETKYNDKWESFSWGMDDRVILSEFKQQ HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH MDRSKPFFVFIGMSQTHSPYFTNSISGSSLNKLQRHKKALEENVTLIDDLISFIKSSSDQ HHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC ETLLIVTADHGESFGEEGANAHNYSLYNQEVDVPFLLYLIQSNKLYIPLVGSSIHFKETL CEEEEEECCCCCCCHHCCCCCCCCEEECCCCCCHHEEEEEECCCEEEEEECCCCHHHHHH LQLMENKMENKEMSHHFLKSSYQPTIPFKTWNSEIQRGIVKREKKYIYHNDKNILFEMDW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEECC NDFDRKIINDPILKEKILKEIYAETSK CHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA